Job Description P15042 Confidence 98.15% Date Thu Jan 5 11:34:23 GMT 2012 Rank 45 Aligned Residues 75 % Identity 19% Template c3ii6Y_ PDB info PDB header:ligase/dna binding protein Chain: Y: PDB Molecule:dna ligase 4; PDBTitle: structure of human xrcc4 in complex with the tandem brct2 domains of dna ligaseiv. Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	D	S	P	F	A	G	K	T	V	V	L	T	G	S	L	S	Q	M	S	R	D	D	A	K	A	R	L	V	E	L	G	A	K	V	A	G	S	V	S	K	K	T	D	L	V	I	A	G	E	A	A	G	S	K	L	A	K	A	Q	E	L	G	I	E	V	I	D	E	A	E	M	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	S	N	I	F	E	D	V	E	F	C	V	M	S	G	T	D	S	Q	P	K	P	D	L	E	N	R	I	A	E	F	G	G	Y	I	V	Q	N	P	G	P	D	T	Y	C	V	I	A	G	S	E	N	I	R	V	K	N	I	I	L	S	N	K	H	D	V	V	K	P	A	W	L	L	E
Template Known Secondary structure						T	T	T	T										S	S	S												T	T					S	S			T	T							S	S									T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions