Job Description P15042 Confidence 98.32% Date Thu Jan 5 11:34:23 GMT 2012 Rank 39 Aligned Residues 117 % Identity 25% Template c3c1zA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna integrity scanning protein disa; PDBTitle: structure of the ligand-free form of a bacterial dna damage2 sensor protein Resolution 2.30 Å

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		454	.	.	.	.	.	460	.	.	.	.	.	.													.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Query Sequence		M	G	D	K	I	I	D	Q	L	V	E	K	E	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	H	T	P	A	D	L	F	K	L	T	A	G	K	L	T	G	L	E	R	M	G	P	K	S	A	Q	N	V	V	N	A	L	E	K	A	K	E	T	T	F	A	R	F	L	Y	A	L	G	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																			.																																.	.	.	.	.
Template Conservation																																													.
Template Sequence		I	V	E	E	I	R	P	Y	I	V	E	L	G	E	E	G	R	L	A	R	M	Q	L	R	E	L	T	E	D	V	D	D	L	L	V	L	L	I	M	D	Y	S	S	.	E	E	V	E	E	E	T	A	Q	N	I	L	Q	D	F	I	T	R	R	E	P	S	P	I	S	I	S	R	V	L	G	Y	D	V	Q	Q
Template Known Secondary structure													T	G	G	G	G												T	T													S	S	.	S																	T	S											T	T				S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
																					517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	E	V	G	E	A	T	A	A	G	L	A	A	Y	F	G	T	L	E	A	L	E	A	A	S	I	E	E	L	Q	K	V	P	D	V	G	I	V	V	A	S	H	V	H	N	F	F	A	E	E	S	N	R	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	Q	L	D	D	V	L	V	S	A	R	G	Y	R	L	L	K	T	V	A	R	I	P	L	S	I	G	Y	N	V	V	R	M	F	K	T	L	D	Q	I	S	K	A	S	V	E	D	L	K	K	V	E	G	I	G	E	K	R	A	R	A	I	S	E	S	I	S	S	L	K	H	R	K
Template Known Secondary structure		G	G	G	G	G	G		B					S							T	S																S					T	T								T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions