Job Description P15042 Confidence 97.58% Date Thu Jan 5 11:34:23 GMT 2012 Rank 61 Aligned Residues 68 % Identity 18% Template c3al3A_ PDB info PDB header:dna binding protein/protein binding Chain: A: PDB Molecule:dna topoisomerase 2-binding protein 1; PDBTitle: crystal structure of topbp1 brct7/8-bach1 peptide complex Resolution 2.15 Å

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		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630			.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.		.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																		.
Query SS confidence																																		.	.																		.
Query Sequence		A	G	K	T	V	V	L	T	G	S	L	S	Q	M	S	R	D	D	A	K	A	R	L	V	E	L	G	A	K	V	A	G	.	.	S	V	S	K	K	T	D	L	V	I	A	G	E	A	A	G	S	.	K	L	A	K	A	Q	E	L	G	I	E	V	I	D	E	A	E	M	L	R
Query Conservation																																		.	.																		.
Alig confidence											.																							.	.																		.
Template Conservation											.
Template Sequence		K	Q	Y	I	F	Q	L	S	S	.	L	N	P	Q	E	R	I	D	Y	C	H	L	I	E	K	L	G	G	L	V	I	E	K	Q	C	F	D	P	T	C	T	H	I	V	V	G	H	P	L	R	N	E	K	Y	L	A	S	V	A	A	G	K	W	V	L	H	R	S	Y	L	E	A
Template Known Secondary structure										S	.																T	T							S	S			T	T		S					S	S			S	S									T	T						T
Template Predicted Secondary structure											.
Template SS confidence
		1266	.	.	.	1270	.	.	.	.		.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions