Job Description P15042 Confidence 98.48% Date Thu Jan 5 11:34:23 GMT 2012 Rank 33 Aligned Residues 98 % Identity 17% Template c2xnkA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase 2-binding protein 1; PDBTitle: structure and function of the rad9-binding region of the dna damage2 checkpoint adaptor topbp1 Resolution 2.60 Å

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		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.				.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.		.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.																																						.
Query SS confidence																												.	.	.																																						.
Query Sequence		N	V	I	S	E	L	L	A	E	G	V	H	W	P	A	P	I	V	I	N	A	E	E	I	D	S	.	.	.	P	F	A	G	K	T	V	V	L	T	G	S	L	S	Q	M	S	R	D	D	A	K	A	R	L	V	E	L	G	A	K	V	A	G	S	V	S	.	K	K	T	D	L	V	I	A	G	E	A	A	G
Query Conservation																												.	.	.																																						.
Alig confidence																												.	.	.												.																										.
Template Conservation																																										.
Template Sequence		S	W	I	K	T	L	W	E	K	S	Q	E	K	K	I	T	R	Y	T	D	I	N	X	E	D	F	K	C	P	I	F	L	G	C	I	I	C	V	T	G	.	L	C	G	L	D	R	K	E	V	Q	Q	L	T	V	K	H	G	G	Q	Y	X	G	Q	L	K	X	N	E	C	T	H	L	I	V	Q	E	P	K	G
Template Known Secondary structure													T	T	S		S	S	T	T	S	S		G	G	G	G	B			T	T	T	T							S	.																T	T					S	S			T	T	T							S	S	S		S
Template Predicted Secondary structure																																										.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	L	A	K	A	Q	E	L	G	I	E	V	I	D	E	A	E	M	L	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	Y	E	C	A	K	R	W	N	V	H	C	V	T	T	Q	W	F	F	D	S	I
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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