Return to main results Retrieve Phyre Job Id

Job DescriptionP15042
Confidence97.12%DateThu Jan 5 11:34:23 GMT 2012
Rank71Aligned Residues93
% Identity24%Templatec2w9mB_
PDB info PDB header:dna replicationChain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans
Resolution2.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   471........480.........490.........500.. .......510.........520.........530. ........540
Predicted Secondary structure 










.........










.


Query SS confidence 































. . . . . . . . .




























.








Query Sequence  PADLFKLTAGKLTGLERMGPKSAQNVVNALEK. . . . . . . . . AKETTFARFLYALGIREVGEATAAGLAAY. FGTLEALEA
Query Conservation    


 
    
  
 
 




 

   
  .........

   
 
 
 



  

   
  

  .
  
  
  
Alig confidence 































.........




.






















.








Template Conservation     
       
  




  

 

 
 
 

    

 
    
.     
  
 






  
   

 

 

  
Template Sequence  NEETPELLAREFTGIPKVGKGIAAELSDFARSGTFAPLEAAAGQLP. PGLLDLLGVRGLGPKKIRSLWLAGIDSLERLRE
Template Known Secondary structure  SS
TTT
S
TT

S

S
.TTSTT

TT

S
Template Predicted Secondary structure 













.










Template SS confidence 















































































   48.50.........60.........70.........80.........90... ......100.........110.........120......
 
   541 ........550.........560....
Predicted Secondary structure 
.





Query SS confidence 
.






















Query Sequence  A. SIEELQKVPDVGIVVASHVHNFF
Query Conservation 
.  
 
  
 


   
 

   
Alig confidence 
.






















Template Conservation 
     
    
 
 
    

  
Template Sequence  AAESGELAGLKGFGAKSAATILENV
Template Known Secondary structure  TTTTTSTT

Template Predicted Secondary structure 










Template SS confidence 
























   127..130.........140.........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions