Job Description P15042 Confidence 65.13% Date Thu Jan 5 11:34:23 GMT 2012 Rank 244 Aligned Residues 72 % Identity 18% Template c2r8kB_ PDB info PDB header:replication, transferase/dna Chain: B: PDB Molecule:dna polymerase eta; PDBTitle: structure of the eukaryotic dna polymerase eta in complex with 1,2-2 d(gpg)-cisplatin containing dna Resolution 3.30 Å

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		494	.	.	.	.	.	500	.	.	.	.	.	.	.											.	.	510	.	.	.	.	.	.						.	.	.	520	.	.	.	.	.	.	.	.	.	530									.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		Q	N	V	V	N	A	L	E	K	A	K	E	T	T	.	.	.	.	.	.	.	.	.	.	F	A	R	F	L	Y	A	L	G	.	.	.	.	.	I	R	E	V	G	E	A	T	A	A	G	L	A	A	.	.	.	.	.	.	.	.	Y	F	G	T	L	E	A	L	E	A	A	S	I	E	E	L	Q	K	V	P
Query Conservation																.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	N	V	C	K	L	A	S	N	Y	K	K	P	D	A	Q	T	I	V	K	N	D	C	L	L	D	F	L	D	C	G	K	F	E	I	T	S	F	W	T	L	G	G	V	L	G	K	E	L	I	D	V	L	D	L	P	H	E	N	S	I	K	H	I	R	E	T	W	P	D	N	A	G	Q	L	K	E	F	L
Template Known Secondary structure													S		S	S							G	G	G						T	S	S	S			G	G	G	S	S	S	S		S										T	T			S	S										S		S		T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		551																			.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	V	V	A	S	H	V	H	N	F	F	A
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	K	V	K	Q	S	D	Y	D	R	S	T	S	N	I	D	P	L	K	T	A	D	L	A	E	K	L	F	K	L	S	R
Template Known Secondary structure					T	S	S	T	T			S	S	S					T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions