Return to main results Retrieve Phyre Job Id

Job DescriptionP15042
Confidence77.62%DateThu Jan 5 11:34:23 GMT 2012
Rank171Aligned Residues24
% Identity38%Templatec2opfA_
PDB info PDB header:hydrolase/dnaChain: A: PDB Molecule:endonuclease viii; PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   406...410......... 420.........430..
Predicted Secondary structure 








..








Query SS confidence 













. .












Query Sequence  THCPVCGSDVERVE. . GEAVARCTGGLIC
Query Conservation    

 


 
    ..      
 
   
Alig confidence 













..








...
Template Conservation   


 

  
      

 
  

 ...
Template Sequence  EPCERCGSIIEKTTLSSAPFYWCPG. . . C
Template Known Secondary structure  SB
TTT

B
TT
TT...T
Template Predicted Secondary structure 












...
Template SS confidence 




























   235....240.........250......... 260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions