 |
Job Description | P15042 | Confidence | 68.55% | Date | Thu Jan 5 11:34:23 GMT 2012 |
Rank | 221 | Aligned Residues | 46 |
% Identity | 20% | Template | c2oh2B_ |
PDB info |
PDB header:transferase/dna | Chain: B: PDB Molecule:dna polymerase kappa; |
PDBTitle: ternary complex of human dna polymerase
|
Resolution | 3.05 Å |
|
  |   |
450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | D | G | M | G | D | K | I | I | D | Q | L | V | E | K | E | Y | V | H | T | P | A | D | L | F | K | L | T | A | G | K | L | T | G | L | E | R | M | G | P | K | S | A | Q | N | V | V | N | A |
Query Conservation |   |
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
| . |
|   |
|   |
|
|
|   |   | . |   |   |   |   |
|   |   |   | . | . |   |
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
K | V | S | G | I | G | K | V | T | E | K | M | L | K | A | L | G | . |
I | I | T | C | T | E | L | Y | Q | . |
Q | R | A | L | L | S | L | L | . |
. |
F | S | E | T | S | W | H | Y | F | L | H | I |
Template Known Secondary structure |   |
T | S | T | T |
|
|  |  |  |  |  |  |  |  |  | T | T | . |
|
| B |  |  |  |  |  |  | . | T |  |  |  |  |  |  |  | . | . | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |
| . |
|  |  |  |  |  |  |  | . | . |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
353 | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | |
370 | . | . | . | . | . | . | . | . | |
. | 380 | . | . | . | . | . | . | |
|
. | . | . | 390 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|