Return to main results Retrieve Phyre Job Id

Job DescriptionP15042
Confidence34.96%DateThu Jan 5 11:34:23 GMT 2012
Rank429Aligned Residues20
% Identity30%Templatec2gajA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:dna topoisomerase i; PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   408.410.........420 .........430..
Predicted Secondary structure 







..







Query SS confidence 












. .











Query Sequence  CPVCGSDVERVEG. . EAVARCTGGLIC
Query Conservation 

 


 
     ..     
 
   
Alig confidence 

.









..





....

Template Conservation 

.

  
     
 
 
  
.... 
Template Sequence  CS. CGKEMRLSFGKYGFYLKC. . . . EC
Template Known Secondary structure 
S.SS
TT
....SS
Template Predicted Secondary structure 

.








....
Template SS confidence 


























   559560 .........570........ .580
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions