 |
Job Description | P15042 | Confidence | 97.88% | Date | Thu Jan 5 11:34:23 GMT 2012 |
Rank | 54 | Aligned Residues | 75 |
% Identity | 19% | Template | c2ebwA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:dna repair protein rev1; |
PDBTitle: solution structure of the brct domain from human dna repair2 protein rev1
|
Resolution | UNK |
|
 |
  |   |
590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | |
. | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | A | E | E | I | D | S | P | F | A | G | K | T | V | V | L | T | G | S | L | S | Q | M | S | R | D | D | A | K | A | R | L | V | E | L | G | A | K | V | A | G | S | V | S | K | K | . |
T | D | L | V | I | A | G | E | A | A | G | S | K | L | A | K | A | Q | E | L | G | I | E | V | I | D | E | A | E | M | L | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |
|
|   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|
|
| . |
|   |   |
|
|   |
|   |   |   |
|
|
|
|   |
|
|   |   |
|
|
|   |
|
|   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
| . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|
|   |   |   |
|
|   |
|
Template Sequence |   |
S | S | G | T | S | S | T | I | F | S | G | V | A | I | Y | V | N | G | . |
Y | T | D | P | S | A | E | E | L | R | K | L | M | M | L | H | G | G | Q | Y | H | V | Y | Y | S | R | S | K | T | T | H | I | I | A | T | N | L | P | N | A | K | I | K | E | L | K | . |
. |
G | E | K | V | I | R | P | E | W | I | V | E |
Template Known Secondary structure |   |
|
| S |
|
|
|
| T | T | T | T |
|  |  |  |  |
| S | . | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
| S | S |
|
| S | S | S |
|
|  |  |  |
| S |
|
|
| T | T |  |  |  |  | T | S | . | . | S | S |
|
| B |
| T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
. | . | . | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|