 |
Job Description | P15042 | Confidence | 33.71% | Date | Thu Jan 5 11:34:23 GMT 2012 |
Rank | 440 | Aligned Residues | 53 |
% Identity | 13% | Template | c2dkzA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:hypothetical protein loc64762; |
PDBTitle: solution structure of the sam_pnt-domain of the2 hypothetical protein loc64762
|
Resolution | UNK |
|
  |   |
453 | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | M | G | D | K | I | I | D | Q | L | V | E | K | E | Y | V | H | T | P | A | D | L | F | K | L | T | A | G | K | L | T | G | L | E | R | M | G | P | K | S | A | Q | N | V | V | N | A | L | E | K | A | K | E | T | T |
Query Conservation |   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |   |   |
|   |   |   |   | . |
|
|
| . |   |   |
|
|   |
|
|   |   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
G | L | S | E | D | V | I | S | F | F | V | T | E | K | . |
I | D | G | . |
N | L | L | V | Q | L | T | E | E | I | L | S | E | D | F | K | L | S | K | L | Q | V | K | K | I | M | Q | F | I | N | G | S | G | P | S | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | T | T | T | . |
|
|  | . |  |  |  |  |  |
|
|  |  |  |  |  |  | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | |
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|