Job Description P15042 Confidence 95.64% Date Thu Jan 5 11:34:23 GMT 2012 Rank 91 Aligned Residues 104 % Identity 25% Template c2csdB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:topoisomerase v; PDBTitle: crystal structure of topoisomerase v (61 kda fragment) Resolution 2.90 Å

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		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	D	K	I	I	D	Q	L	V	E	K	E	Y	V	H	T	P	A	D	L	F	K	L	T	A	G	K	L	T	G	L	E	R	M	G	P	K	S	A	Q	N	V	V	N	A	L	E	K	A	K	E	T	T	F	A	R	F	L	Y	A	L	G	I	R	E	V	G	E	A	T	A	A	G	L	A	A	Y	F
Query Conservation
Alig confidence																.	.																																		.	.	.	.	.	.	.
Template Conservation																.	.																																		.	.	.	.	.	.	.
Template Sequence		G	L	S	P	D	A	A	D	E	L	I	E	H	F	.	.	E	S	I	A	G	I	L	A	T	D	L	E	E	I	E	R	M	Y	E	E	G	R	L	S	E	E	A	Y	R	A	A	V	E	.	.	.	.	.	.	.	I	Q	L	A	E	L	T	K	K	E	G	V	G	R	K	T	A	E	R	L	L	R	A	F
Template Known Secondary structure																.	.		S							S											T	T	S	S											.	.	.	.	.	.	.									S	T	T			S	S
Template Predicted Secondary structure																.	.																																		.	.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.								.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		533				.	.	.	.	.		.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure			.	.	.						.
Query SS confidence			.	.	.						.
Query Sequence		G	.	.	.	T	L	E	A	L	.	E	A	A	S	I	E	E	L	Q	K	V	P	D	V	G	I	V	V	A	S	H	V	H	N	F	F	A
Query Conservation			.	.	.						.
Alig confidence			.	.	.						.
Template Conservation
Template Sequence		G	N	P	E	R	V	K	Q	L	A	R	E	F	E	I	E	K	L	A	S	V	E	G	V	G	E	R	V	L	R	S	L	V	P	G	Y	A
Template Known Secondary structure		S	S											T						T	T	S	T	T								T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions