Job Description P15042 Confidence 100.00% Date Thu Jan 5 11:34:23 GMT 2012 Rank 9 Aligned Residues 314 % Identity 45% Template c1zauA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: adenylation domain of nad+ dependent dna ligase from2 m.tuberculosis Resolution 3.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		E	S	I	E	Q	Q	L	T	E	L	R	T	T	L	R	H	H	E	Y	L	Y	H	V	M	D	A	P	E	I	P	D	A	E	Y	D	R	L	M	R	E	L	R	E	L	E	T	K	H	P	E	L	I	T	P	D	S	P	T	Q	R	V	G	A	A	.	P	L	A	A	F	S	Q	I	R	H	E	V	P	M	L
Query Conservation																																																																		.
Alig confidence																																																																		.
Template Conservation
Template Sequence		P	E	V	L	R	Q	W	Q	A	L	A	E	E	V	R	E	H	Q	F	R	Y	Y	V	R	D	A	P	I	I	S	D	A	E	F	D	E	L	L	R	R	L	E	A	L	E	E	Q	H	P	E	L	R	T	P	D	S	P	T	Q	L	V	G	G	A	G	F	A	T	D	F	E	P	V	D	H	L	E	R	M	L
Template Known Secondary structure						T	T																T	T	T				S	S		T																T	S	S	T	T			T	T		T	T	T	T		S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	N	V	F	D	E	E	S	F	L	A	F	N	K	R	V	Q	D	R	L	K	N	N	E	K	V	T	W	C	C	E	L	K	L	D	G	L	A	V	S	I	L	Y	E	N	G	V	L	V	S	A	A	T	R	G	D	G	T	T	G	E	D	I	T	S	N	V	R	T	I	R	A	I	P	L	K	L	H
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		S	L	D	N	A	F	T	A	D	E	L	A	A	W	A	G	R	I	H	A	E	V	G	.	.	D	A	A	H	Y	L	C	E	L	K	I	D	G	V	A	L	S	L	V	Y	R	E	G	R	L	T	R	A	S	T	R	G	D	G	R	T	G	E	D	V	T	L	N	A	R	T	I	A	D	V	P	E	R	L	T
Template Known Secondary structure						B	S	S										G	G	G	T	T	T		.	.	S		S										S								G	G	G	B			B		B	B		T	T	S	S				B								S	S	S			S	B
Template Predicted Secondary structure																									.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		161	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		G	E	N	.	.	.	I	P	A	R	L	E	V	R	G	E	V	F	L	P	Q	A	G	F	E	K	I	N	E	D	A	R	R	T	G	G	K	V	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	P	R	I	T	A	K	R	P	L	T	F	F	C	Y	G	V	G	V	L	E	G	G	E	L	P	D
Query Conservation					.	.	.
Alig confidence					.	.	.																																																																									.
Template Conservation																																																																																.
Template Sequence		P	G	D	D	Y	P	V	P	E	V	L	E	V	R	G	E	V	F	F	R	L	D	D	F	Q	A	L	N	A	S	L	V	E	E	G	K	A	P	F	A	N	P	R	N	S	A	A	G	S	L	R	Q	K	D	P	A	V	T	A	R	R	R	L	R	M	I	C	H	G	L	G	H	V	E	G	F	R	P	.	A
Template Known Secondary structure			B	T	T	B				S									B												S		S	S	T	T	S				S	S										T		S	S							S			B					B					S	S				.	S
Template Predicted Secondary structure																																																																																.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	L	G	R	L	L	Q	F	K	K	W	G	L	P	V	S	D	R	V	T	L	C	E	S	A	E	E	V	L	A	F	Y	H	K	V	E	E	D	R	P	T	L	G	F	D	I	D	G	V	V	I	K	V	N	S	L	A	Q	Q	E	Q	L	G	F	V	A	R	A	P	R	W	A	V	A	F	K	F	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	H	Q	A	Y	L	A	L	R	A	W	G	L	P	V	S	E	H	T	T	L	A	T	D	L	A	G	V	R	E	R	I	D	Y	W	G	E	H	R	H	E	V	D	H	E	I	D	G	V	V	V	K	V	D	E	V	A	L	Q	R	R	L	G	S	T	S	R	A	P	R	W	A	I	A	Y	K	Y	P	P
Template Known Secondary structure		B										T	T	T										B													T	T	T	T		S	S		S	S											B					T	T	S		B		S	S	S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		318
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		328

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions