Job Description P15042 Confidence 61.51% Date Thu Jan 5 11:34:23 GMT 2012 Rank 280 Aligned Residues 74 % Identity 19% Template c1jihA_ PDB info PDB header:translation Chain: A: PDB Molecule:dna polymerase eta; PDBTitle: yeast dna polymerase eta Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.											.	.	510	.	.	.	.	.	.						.	.	.	520	.	.	.	.	.	.	.	.	.	530									.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		S	A	Q	N	V	V	N	A	L	E	K	A	K	E	T	T	.	.	.	.	.	.	.	.	.	.	F	A	R	F	L	Y	A	L	G	.	.	.	.	.	I	R	E	V	G	E	A	T	A	A	G	L	A	A	.	.	.	.	.	.	.	.	Y	F	G	T	L	E	A	L	E	A	A	S	I	E	E	L	Q	K
Query Conservation																		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	T	K	N	V	C	K	L	A	S	N	Y	K	K	P	D	A	Q	T	I	V	K	N	D	C	L	L	D	F	L	D	C	G	K	F	E	I	T	S	F	W	T	L	G	G	V	L	G	K	E	L	I	D	V	L	D	L	P	H	E	N	S	I	K	H	I	R	E	T	W	P	D	N	A	G	Q	L	K	E
Template Known Secondary structure			S	S									T	T	T		S	S							G	G	G						T	S	S	S			G	G	G	S	G	G	G	S	S										T	T			S	S	S									S		S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		549	550	.																			.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	V	V	A	S	H	V	H	N	F	F	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	D	A	K	V	K	Q	S	D	Y	D	R	S	T	S	N	I	D	P	L	K	T	A	D	L	A	E	K	L	F	K	L	S	R
Template Known Secondary structure								T	S	T	T			T	T	T		S	S		T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions