Job Description P15042 Confidence 96.07% Date Thu Jan 5 11:34:23 GMT 2012 Rank 87 Aligned Residues 74 % Identity 20% Template c1d8lA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:protein (holliday junction dna helicase ruva); PDBTitle: e. coli holliday junction binding protein ruva nh2 region2 lacking domain iii Resolution 2.50 Å

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		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.				.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		G	K	L	T	G	L	E	R	M	G	P	K	S	A	Q	N	V	V	N	A	L	E	K	A	K	E	T	T	F	A	R	F	L	Y	A	L	G	I	R	E	V	G	E	A	T	A	A	G	L	A	A	Y	F	G	T	.	.	.	L	E	A	L	E	A	A	S	I	E	E	L	Q	K	V	P	D	V	G	I	V	V
Query Conservation																																																									.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	A	Q	L	L	Y	G	F	N	N	K	Q	E	R	T	L	F	K	E	L	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	G	V	G	P	K	L	A	L	A	I	L	S	G	M	S	A	Q	Q	F	V	N	A	V	E	R	E	E	V	G	A	L	V	K	L	P	G	I	G	K	K	T
Template Known Secondary structure		T	T								S	S											T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T													S											T	T								S	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.															.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		557	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	H	V	H	N	F	F	A	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	R	L	I	V	E	M	K	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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