|   |
1064 | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | |
. | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | |
|
|
. | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | P | T | L | F | C | F | H | P | A | S | G | F | A | W | Q | F | S | V | L | S | R | Y | L | D | P | Q | . |
W | S | I | I | G | I | Q | S | P | R | P | N | G | P | M | Q | T | A | A | . |
. |
. |
N | L | D | E | V | C | E | A | H | L | A | T | L | L | E | Q | Q | P | H | G | P | Y | Y | L | L | G | Y | S | L |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   | . |   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
A | F | A | H | F | V | L | I | H | T | I | C | H | G | A | W | I | W | H | K | L | K | P | L | L | E | A | L | G | H | K | V | T | A | L | D | L | A | A | S | G | V | D | P | R | Q | I | E | E | I | G | S | F | D | E | Y | S | E | P | L | L | T | F | L | E | A | L | P | P | G | E | K | V | I | L | V | G | E | S | C |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
|
| T | T |
|
| G | G | G | G | T | T |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| T | T | S | T | T |
| S |
|
| G | G | G |
|
| S |  |  |  |  | T |  |  |  |  |  |  |  |  |  | S |
| T | T |
|
|  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 1200 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | T | L | A | Q | G | I | A | A | R | L | R | A | R | G | E | Q | V | A | F | L | G | L | L | D | T | W | P | P | E | T | Q | N | W | Q | E | K | E | A | N | G | L | D | P | E | V | L | A | E | I | N | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | R | E | A | F | L | A | A | Q | Q |
Query Conservation |   |
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | G | L | N | I | A | I | A | A | D | K | Y | . |
. |
. |
C | E | K | I | A | A | A | V | F | H | N | S | V | L | P | D | T | E | H | C | P | S | Y | V | V | D | K | L | M | E | V | F | P | D | W | K | D | T | T | Y | F | T | Y | T | K | D | G | K | E | I | T | G | L | K | L | G | F | T | L | L | R | E | N | L | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | G | G | G |  |  |  |  |  |  |  | S |
|
|
|
|
| S | S | S |
| T | T |  |  |  |  |  |  |  |  |  | S |
|
|
| T | T |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
1203 | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | |
1270 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
G | S | T | S | T | E | L | F | T | T | I | E | G | N | . |
. |
. |
. |
. |
. |
. |
Y | A | D | A | V | R | L | L | T | T | A | H | S | V | P | F | D | G | K | A | T | L | F | V | A | E | R | T | L | Q | E | G | M | S | P | E | R | A | W | S | P | W | I | A | E | L | D | I | Y | R | Q | D | C | . |
A | H | V | D | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
| . |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
Template Sequence |   |
T | L | C | G | P | E | E | Y | E | L | A | K | M | L | T | R | K | G | S | L | F | Q | N | I | L | A | K | R | P | F | F | T | K | E | G | Y | G | S | I | K | K | I | Y | V | W | T | D | Q | D | E | I | F | L | P | E | F | Q | L | W | Q | I | E | N | Y | K | P | D | K | V | Y | K | V | E | G | G | D | H | K | L | Q |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |  |  |  |  |  |
|
|
| B |
|
|
|  |  |  |  | T | T | S |
|
|
|
| T | T | T | G | G | G | S |
|  |  |  |  |  |
| T | T |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |
|
| S |
|
| S |
|  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |
  |   |
1275 | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . | 1290 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | P | G | T | F | E | K | I | G | P | I | I | R | A | T | L | N | R |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
| . | . |   |   |   |   |   |   |
|   |   |
|
|   |
|
Template Sequence |   |
L | T | K | T | . |
. |
K | E | I | A | E | I | L | Q | E | V | A | D | T |
Template Known Secondary structure |   |
 |  | S |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
239 | 240 | . | . | |
|
. | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |