|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | L | V | A | A | Q | P | G | I | W | M | A | E | K | L | S | E | L | P | S | A | W | S | V | A | H | Y | V | E | L | T | G | E | V | D | S | P | L | L | A | R | A | V | V | A | G | L | A | Q | A | D | T | L | R | M | R | F | T | E | D | N | G | E | V | W | Q | W | V | D | D | A | L | T | F | E | L | P | E | I |
Query Conservation |   |
  |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | P | G | S | V | I | R | K | . |
L | S | H | S | E | E | V | F | A | Q | Y | E | V | F | . |
T | S | M | T | I | Q | L | R | G | V | I | D | V | D | A | L | S | D | A | F | D | A | L | L | E | T | H | P | V | L | A | S | H | L | E | Q | S | S | D | G | G | W | N | L | V | A | D | D | L | L | H | S | G | I | C | V |
Template Known Secondary structure |   |
| T | T | S |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  | T | T |
|  | . |  |  |  |  |  |  |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | S |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |
|
| S | S | S |
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | L | R | T | N | I | D | P | H | G | T | A | Q | A | L | M | Q | A | D | L | Q | Q | D | L | R | V | D | S | G | K | P | L | V | F | H | Q | L | I | Q | V | A | D | N | R | W | Y | W | Y | Q | R | Y | H | H | L | L | V | D | G | F | S | F | P | A | I | T | R | Q | I | A | N | I | Y | C | T | W | L | R | G | E |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |
|   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|
|
Template Sequence |   |
I | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | L | R | L | D | Q | S | . |
V | S | L | L | H | L | Q | L | I | L | R | E | G | G | A | E | L | T | L | Y | L | H | H | C | M | A | D | G | H | H | G | A | V | L | V | D | E | L | F | S | R | Y | T | D | A | V | T | T | G |
Template Known Secondary structure |   |
 |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| T | T | . | T |
| S |  |  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
  |   |
165 | . | . | . | |
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | P | A | . |
. |
. |
S | P | F | T | P | F | A | D | V | V | E | E | Y | Q |
Query Conservation |   |
  |   |   |   | . | . | . |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
D | P | G | P | I | T | P | Q | P | T | P | L | S | M | E | A | V | L | A | Q | R |
Template Known Secondary structure |   |
S |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |