Job Description P11454 Confidence 100.00% Date Thu Jan 5 11:32:39 GMT 2012 Rank 2 Aligned Residues 561 % Identity 21% Template d1pg4a_ SCOP info Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Resolution 1.75

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		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.					.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.							.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																									.	.	.	.																															.	.	.	.	.	.
Query SS confidence																									.	.	.	.																															.	.	.	.	.	.
Query Sequence		P	T	L	I	Q	H	A	E	R	L	K	M	L	I	A	Q	F	A	A	D	P	A	L	.	.	.	.	L	C	G	D	V	D	I	M	L	P	G	E	Y	A	Q	L	A	Q	L	N	A	T	Q	V	E	I	P	E	T	T	.	.	.	.	.	.	L	S	A	L	V	A	E	Q	A	A	K	T	P	D	A	P	A
Query Conservation																									.	.	.	.																															.	.	.	.	.	.
Alig confidence																									.	.	.	.																															.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	C	L	I	N	P	E	Q	Y	E	T	K	Y	K	Q	S	I	N	D	P	D	T	F	W	G	E	Q	G	K	I	L	D	W	I	T	P	Y	Q	K	V	K	N	T	S	F	A	P	G	N	V	S	I	K	W	Y	E	D	G	T	L	N	L	A	A	N	C	L	D	R	H	L	Q	E	N	G	D	R	T	A
Template Known Secondary structure					S	S																								G	G	G	S			S	B			S									T	T							S	T	T										T	G	G	G					T	T	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		474	.							.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.
Query Sequence		L	A	.	.	.	.	.	.	D	A	R	Y	L	F	S	Y	R	E	M	R	E	Q	V	V	A	L	A	N	L	L	R	E	R	G	V	K	P	G	D	S	V	A	V	A	L	P	R	S	V	F	L	T	L	A	L	H	A	I	V	E	A	G	A	A	W	L	P	L	D	T	G	Y	P	D	D	R	L	K	M	M
Query Conservation				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	W	E	G	D	D	T	S	Q	S	K	H	I	S	Y	R	E	L	H	R	D	V	C	R	F	A	N	T	L	L	D	L	G	I	K	K	G	D	V	V	A	I	Y	M	P	M	V	P	E	A	A	V	A	M	L	A	C	A	R	I	G	A	V	H	S	V	I	F	G	G	F	S	P	E	A	V	A	G	C
Template Known Secondary structure							S	S	T	T																									T			T	T									S	S														T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.																																			.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	D	A	R	P	S	L	L	I	T	T	D	D	Q	L	P	R	F	S	D	V	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	S	L	C	Y	N	A	P	L	T	P	Q	G	S	A	P	L	Q	L	S	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	D	S	S	S	R	L	V	I	T	A	D	E	G	V	R	A	G	R	S	I	P	L	K	K	N	V	D	D	A	L	K	N	P	N	V	T	S	V	E	H	V	I	V	L	K	R	T	G	S	D	I	D	W	Q	E	G	R	D	L	W	W	R	D	L	I	E	K	A	S	P	E	H	Q	P	E	A	M	N
Template Known Secondary structure						T		S						S					T	T					S									T	S	T	T			S									S	S								B	T	T									T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.		.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650		.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.		.	670
Predicted Secondary structure																																			.																									.																			.
Query SS confidence																																			.																									.																			.
Query Sequence		P	H	H	T	A	Y	I	I	F	T	S	G	S	T	G	R	P	K	G	V	M	V	G	Q	T	A	I	V	N	R	L	L	W	.	M	Q	N	H	Y	P	L	T	G	E	D	V	V	A	Q	K	T	P	C	S	F	D	V	S	.	V	W	E	F	F	W	P	F	I	A	G	A	K	L	V	M	A	E	.	P	E
Query Conservation																																			.																									.																			.
Alig confidence																																			.																									.																			.
Template Conservation
Template Sequence		A	E	D	P	L	F	I	L	Y	T	S	G	S	T	G	K	P	K	G	V	L	H	T	T	G	G	Y	L	V	Y	A	A	T	T	F	K	Y	V	F	D	Y	H	P	G	D	I	Y	W	C	T	A	D	V	G	W	V	T	G	H	S	Y	L	L	Y	G	P	L	A	C	G	A	T	T	L	M	F	E	G	V	P
Template Known Secondary structure		T	T	S										S	S	S	S								S															T	T			T	T							S		T	T	S							T	T						T	T								S		T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.				.	740	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		A	H	R	D	P	L	A	M	Q	Q	F	F	A	E	Y	G	V	T	T	T	H	F	V	P	S	M	L	A	A	F	V	A	S	L	T	P	Q	T	A	R	Q	S	C	A	T	L	K	Q	V	F	C	S	G	E	A	L	P	A	D	L	C	R	E	W	Q	Q	L	T	.	.	.	G	A	P	L	H	N	L	Y	G
Query Conservation																																																																						.	.	.
Alig confidence																																																																						.	.	.
Template Conservation
Template Sequence		N	W	P	T	P	A	R	M	C	Q	V	V	D	K	H	Q	V	N	I	L	Y	T	A	P	T	A	I	R	A	L	M	A	E	G	D	K	A	I	E	G	T	D	R	S	S	L	R	I	L	G	S	V	G	E	P	I	N	P	E	A	W	E	W	Y	W	K	K	I	G	K	E	K	C	P	V	V	D	T	W	W
Template Known Secondary structure		T	S	S	S	T	T										T		S														T	T	G	G	G	G	T	T	T				T	T								S	S														T	T	T	T		S						B
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		748	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.			.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		P	T	E	A	A	V	D	V	S	W	Y	P	A	F	G	E	E	L	A	Q	V	R	G	S	S	V	P	I	G	Y	P	V	W	N	T	G	L	R	I	L	D	A	M	M	H	P	V	P	P	G	V	A	G	D	L	Y	L	T	G	.	.	I	Q	L	A	Q	G	Y	L	G	R	P	D	L	T	A	S	R	F	I
Query Conservation																																																													.	.
Alig confidence																							.	.	.	.	.																																		.	.
Template Conservation																							.	.	.	.	.
Template Sequence		Q	T	E	T	G	G	F	M	I	T	P	L	P	G	A	I	E	L	K	A	G	.	.	.	.	.	S	A	T	R	P	F	F	G	V	Q	P	A	L	V	D	N	E	G	H	P	Q	E	G	A	T	E	G	N	L	V	I	T	D	S	W	P	G	Q	A	R	T	L	F	G	D	H	E	R	F	E	Q	T	Y	F
Template Known Secondary structure			G	G	G	S	S		S	B				T	T	T			B		T	T	.	.	.	.	.			B	S	B		T	T								T	T			B			S	S									S			T	T						T	T
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.						.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	P	F	A	P	G	E	R	M	Y	R	T	G	D	V	A	R	W	L	D	N	G	A	V	E	Y	L	G	R	S	D	D	Q	L	K	I	R	G	Q	R	I	E	L	G	E	I	D	R	V	M	Q	A	L	P	D	V	E	Q	A	V	T	H	A	C	V	I	N	Q	A	A	A	T	G	G	D	A	R	Q	L
Query Conservation
Alig confidence			.	.	.	.																																																																			.	.	.	.	.	.
Template Conservation			.	.	.	.																																																																			.	.	.	.	.	.
Template Sequence		S	.	.	.	.	T	F	K	N	M	Y	F	S	G	D	G	A	R	R	D	E	D	G	Y	Y	W	I	T	G	R	V	D	D	V	L	N	V	S	G	H	R	L	G	T	A	E	I	E	S	A	L	V	A	H	P	K	I	A	E	A	A	V	V	G	I	P	H	A	I	K	G	.	.	.	.	.	.	Q	A	I
Template Known Secondary structure		S	.	.	.	.	S	S	T	T	S											T	T	S								S	S	S					T	T															S	T	T												T	T	T		.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.																																																																			.	.	.	.	.	.
Template SS confidence
		490					.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.							.	.	.
		906	.	.	.	910	.	.	.	.	.	.	.	.	.				920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		V	G	Y	L	V	S	Q	S	G	L	P	L	D	T	.	.	.	S	A	L	Q	A	Q	L	R	E	T	L	P	P	H	M	V	P	V	V	L	L	Q	L	P	Q	L	P	L	S	A	N	G	K	L	D	R	K	A	L	P	L	P	E	L	K	A	Q	A	P	G	R	A	P	K	A	G	S	E	T	I
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		Y	A	Y	V	T	L	N	H	G	E	E	P	S	P	E	L	Y	A	E	V	R	N	W	V	R	K	E	I	G	P	L	A	T	P	D	V	L	H	W	T	D	S	L	P	K	T	R	S	G	K	I	M	R	R	I	L	R	K	I	A	A	G	D	A	D	P	G	V	V	E	K	L	L	E	E	K	Q
Template Known Secondary structure									T	T																			T		G	G	G			S						S				B		T	T	S		B											T				T	T
Template Predicted Secondary structure
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.