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Job DescriptionP11454
Confidence100.00%DateThu Jan 5 11:32:39 GMT 2012
Rank7Aligned Residues492
% Identity22%Templated1mdba_
SCOP infoAcetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   450.........460.........470.........480.........490.........500.........510.........520.........
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Query Sequence  VEIPETTLSALVAEQAAKTPDAPALADARYLFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAG
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Template Conservation        

   
   
   

  

      


 

      

  
   

  
  


   

       

    
Template Sequence  GCWAGETFGDLLRDRAAKYGDRIAITCGNTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLG
Template Known Secondary structure  TSS
S

TTSTTT

TT



SST
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   20.........30.........40.........50.........60.........70.........80.........90.........
 
   530.........540.........550.........560..... ....570.........580.........590..
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Query Sequence  AAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPR. . . . . . . . . . . . . . . . . FSDVPNLTSLCYNAPLTPQGSAPLQLS
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Template Sequence  ALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPLEDLHTEPVKLPEV
Template Known Secondary structure 


TT

TT
SSTT
TT


S

TTSGGG










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   100.........110.........120.........130.........140.........150.........160.........170.........
 
   593......600.........610.........620.........630.........640.........650.. .......660.........670
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Query Sequence  QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTGEDVVAQKTPCSFDVSVW. . EFFWPFIAGAKLVMAEPE
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Template Sequence  KSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLS. . .
Template Known Secondary structure 
TTS


SSSS

T

TT

S
TTSSSTT

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   180.........190.........200.........210.........220.........230.........240.........250......
 
   671........680.........690.........700.........710.........720.........730.........740.........750
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Query Sequence  AHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTGAPLHNLYGPTE
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Template Sequence  PSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASS. . RRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAE
Template Known Secondary structure  SSSST
S
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TT

SS


TTT
S
TT
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   257..260.........270.........280.........290.. .......300.........310.........320.........330....
 
   751........760.........770........ .780.........790.........800.........810.........820.........
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Query Sequence  AAVDVSWYPAFGEELAQVRGSSVPIGYP. VWNTGLRILDAMMHPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPF
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Template Sequence  GLVNYTRLDDPEEIIVN. . . . . . TQGKPMSPYDESRVWDDHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTED. .
Template Known Secondary structure  S


TTS
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SSTT

TTS
B

TT


TTS
SS
TT
B
TT..
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   335....340.........350. ........360.........370.........380.........390.........400......
 
   830.........840.........850.........860.........870.........880.........890.........900.........
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Query Sequence  APGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYL
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Template Sequence  . . . . GFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLG. . . . . . ERSCVFI
Template Known Secondary structure  ....S

TTS
GGG

SS

TTSTTTTT......
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   407..410.........420.........430.........440.........450.........460......... 470......
 
   910.........920......... 930.........940.........950.........960.....
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Query Sequence  VSQSGLPLDTSALQAQLRET. LPPHMVPVVLLQLPQLPLSANGKLDRKALPLPELKA
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Template Sequence  IPRDEA. PKAAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAISEK
Template Known Secondary structure  SSS
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TT

GGGS
S
SS

B
TTS
B
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   477..480.. .......490.........500.........510.........520.........530..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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