Job Description P11454 Confidence 100.00% Date Thu Jan 5 11:32:39 GMT 2012 Rank 24 Aligned Residues 491 % Identity 14% Template d1lcia_ SCOP info Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Resolution 2.00

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		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.				.	470	.	.	.	.	.	.	.			.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure																															.	.	.										.	.
Query SS confidence																															.	.	.										.	.
Query Sequence		A	Q	L	A	Q	L	N	A	T	Q	V	E	I	P	E	T	T	L	S	A	L	V	A	E	Q	A	A	K	T	.	.	.	P	D	A	P	A	L	A	D	A	.	.	R	Y	L	F	S	Y	R	E	M	R	E	Q	V	V	A	L	A	N	L	L	R	E	R	G	V	K	P	G	D	S	V	A	V	A	L	P	R
Query Conservation																															.	.	.										.	.
Alig confidence																															.	.	.										.	.
Template Conservation
Template Sequence		K	N	I	K	K	G	P	A	P	F	Y	P	L	E	D	G	T	A	G	E	Q	L	H	K	A	M	K	R	Y	A	L	V	P	G	T	I	A	F	T	D	A	H	I	E	V	N	I	T	Y	A	E	Y	F	E	M	S	V	R	L	A	E	A	M	K	R	Y	G	L	N	T	N	H	R	I	V	V	C	S	E	N
Template Known Secondary structure		T	T	S							S	S				S	S															T	S	T	T							T	T	T																								T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	F	L	T	L	A	L	H	A	I	V	E	A	G	A	A	W	L	P	L	D	T	G	Y	P	D	D	R	L	K	M	M	L	E	D	A	R	P	S	L	L	I	T	T	D	D	Q	L	P	R	F	S	D	V	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	Q	F	F	M	P	V	L	G	A	L	F	I	G	V	A	V	A	P	A	N	D	I	Y	N	E	R	E	L	L	N	S	M	N	I	S	Q	P	T	V	V	F	V	S	K	K	G	L	Q	K	I	L	N	V	Q	K	K	L	P	I	I	Q	K	I	I	I	M	D	S	K	T	D	Y	Q	G	F	Q	S	M
Template Known Secondary structure			S	S	T											T								T	T																S						G	G	G												T	T							T	T		S	S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	S	L	C	Y	N	A	P	L	T	P	Q	G	S	A	P	L	Q	L	S	Q	P	H	H	T	A	Y	I	I	F	T	S	G	S	T	G	R	P	K	G	V	M	V	G	Q	T	A	I	V	N	R	L	L	W	M	Q	N	H	Y	P	L	T	G	E	D	V	V	A	Q	K	T	P	C	S	F	D	V	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	F	V	T	S	H	L	P	P	G	F	N	E	Y	D	F	V	P	E	S	F	D	R	D	K	T	I	A	L	I	M	N	S	L	P	K	G	V	A	L	P	H	R	T	A	C	V	R	F	S	H	A	R	D	P	I	F	G	N	Q	I	I	P	D	T	A	I	L	S	V	V	P	F	H	H	G	F	G	M
Template Known Secondary structure									S		T	T			T	T	T								T	T	T	S																											T		T	T	T	S					T	T							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	F	F	W	P	F	I	A	G	A	K	L	V	M	A	E	P	E	A	H	R	D	P	L	A	M	Q	Q	F	F	A	E	Y	G	V	T	T	T	H	F	V	P	S	M	L	A	A	F	V	A	S	L	T	P	Q	T	A	R	Q	S	C	A	T	L	K	Q	V	F	C	S	G	E	A	L	P	A	D	L	C
Query Conservation
Alig confidence																		.	.	.																																					.	.
Template Conservation																		.	.	.																																					.	.
Template Sequence		F	T	T	L	G	Y	L	I	C	G	F	R	V	V	L	M	.	.	.	Y	R	F	E	E	E	L	F	L	R	S	L	Q	D	Y	K	I	Q	S	A	L	L	V	P	T	L	F	S	F	F	A	K	S	T	L	I	.	.	D	K	Y	D	L	S	N	L	H	E	I	A	S	G	G	A	P	L	S	K	E	V	G
Template Known Secondary structure											T							.	.	.	S	S													T	T		S																S		G	.	.	G	G	S			T	T							T	T
Template Predicted Secondary structure																		.	.	.																																					.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		732	.	.	.	.	.		.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.		.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																																				.
Query SS confidence								.																																																				.
Query Sequence		R	E	W	Q	Q	L	.	T	G	A	P	L	H	N	L	Y	G	P	T	E	A	A	V	D	V	S	W	Y	P	A	F	G	E	E	L	A	Q	V	R	G	S	S	V	P	I	G	Y	P	V	W	N	T	G	L	R	I	L	D	.	A	M	M	H	P	V	P	P	G	V	A	G	D	L	Y	L	T	G	I	Q	L
Query Conservation								.																																																				.
Alig confidence								.																											.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	V	A	K	R	F	H	L	P	G	I	R	Q	G	Y	G	L	T	E	T	T	S	A	I	L	I	T	P	E	G	P	G	.	.	.	.	.	.	.	.	.	.	A	V	G	K	V	V	P	F	F	E	A	K	V	V	D	L	D	T	G	K	T	L	G	V	N	Q	R	G	E	L	C	V	R	G	P	M	I
Template Known Secondary structure								T	T		S			B						G	G	G	S	S		S									.	.	.	.	.	.	.	.	.	.			B				T	T								T	T	T			B			T	T									S	T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.											.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	G	Y	L	G	R	P	D	L	T	A	S	R	F	I	A	D	P	F	A	P	G	E	R	M	Y	R	T	G	D	V	A	R	W	L	D	N	G	A	V	E	Y	L	G	R	S	D	D	Q	L	K	I	R	G	Q	R	I	E	L	G	E	I	D	R	V	M	Q	A	L	P	D	V	E	Q	A	V	T	H	A
Query Conservation
Alig confidence																				.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																				.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		M	S	G	Y	V	N	N	P	E	A	T	N	A	L	I	D	K	D	.	.	.	.	.	.	G	W	L	H	S	G	D	I	A	Y	W	D	E	D	E	H	F	F	I	.	.	.	.	.	V	L	I	K	Y	K	G	Y	Q	V	A	P	A	E	L	E	S	I	L	L	Q	H	P	N	I	F	D	A	G	V	A	G
Template Known Secondary structure			S			T	T	B								B		T	T	.	.	.	.	.	.	S												T	T						.	.	.	.	.						T	T														T	S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.							.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.						.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
		890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.		.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		C	V	I	N	Q	A	A	A	T	G	G	D	A	R	Q	L	V	G	Y	L	V	S	Q	S	G	L	P	L	D	T	S	A	L	Q	A	Q	L	R	E	T	L	P	P	H	.	M	V	P	V	V	L	L	Q	L	P	Q	L	P	L	S	A	N	G	K	L	D	R	K	A	L	P	L	P	E
Query Conservation																																														.
Alig confidence									.	.	.	.	.	.																																.
Template Conservation									.	.	.	.	.	.
Template Sequence		L	P	D	D	D	A	G	.	.	.	.	.	.	E	L	P	A	A	V	V	V	L	E	H	G	K	T	M	T	E	K	E	I	V	D	Y	V	A	S	Q	V	T	T	A	K	K	L	R	G	G	V	V	F	V	D	E	V	P	K	L	D	A	R	K	I	R	E	I	L	I	K	A	K	K
Template Known Secondary structure					T	T	T		.	.	.	.	.	.											T	T																S		G	G	G	S		T	T						S	S																	T
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		472	.	.	.	.	.	.							.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.