Job Description P11454 Confidence 30.19% Date Thu Jan 5 11:32:39 GMT 2012 Rank 421 Aligned Residues 154 % Identity 11% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

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		939	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.														.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	Q	L	P	Q	L	P	L	S	A	N	G	K	L	D	R	K	A	L	P	L	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	Q	A	P	G	R	A	P	K	A	G	S	E	T	I	I	A	A	A	F	S	S	L	L	G	C	D	V	Q	D	A	D	A	D	F	F	A	L	G	G	H
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		A	V	T	A	L	I	T	P	F	D	D	N	G	A	I	D	E	K	A	F	C	N	F	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	V	G	T	T	G	E	S	P	T	L	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	.	.	.	.	K	R	V	P	V	V	A	G	A	G	S	N
Template Known Secondary structure										B		T	T	S		B															T	T		S					S	S	T	T	T	T	G	G	G																		T	.	.	.	.	T	S	S		B							S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.
		1006	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.			.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.														.	.	.	.	.	.	1070
Predicted Secondary structure																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	A	M	K	L	A	A	Q	L	S	R	Q	V	A	R	Q	.	.	V	T	P	G	Q	V	M	V	A	S	T	V	A	K	L	A	T	I	I	D	A	E	E	D	S	T	R	R	M	G	F	E	T	I	L	P	L	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	P	T	L	F	C
Query Conservation																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	S	E	A	V	E	L	A	K	H	A	E	K	A	G	A	D	A	V	L	V	V	T	P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	S	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D	F	K	N	I	I	G
Template Known Secondary structure		S														T	T		S									S	S																			S	S												S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		1071	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	P	A	S	G	F	A	W	Q	F	S	V	L	S	R	Y	L	D	P	Q	W	S	I	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	D	A	T	G	K	I	E	R	A	S	E	Q	R	E	K	C	G	K	D	F	V	Q	L	S
Template Known Secondary structure						S			T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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