Job Description P11454 Confidence 94.75% Date Thu Jan 5 11:32:39 GMT 2012 Rank 295 Aligned Residues 153 % Identity 19% Template c3rqcB_ PDB info PDB header:transferase Chain: B: PDB Molecule:probable lipoamide acyltransferase; PDBTitle: crystal structure of the catalytic core of the 2-oxoacid dehydrogenase2 multienzyme complex from thermoplasma acidophilum Resolution 4.01 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.														.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																						.															.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence																						.															.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		Q	H	L	P	L	V	A	A	Q	P	G	I	W	M	A	E	K	L	S	E	.	L	P	S	A	W	S	V	A	H	Y	V	E	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	V	D	.	S	P	L	L	A	R	A	V	V	A	G	L	A	Q	A	D	T	L	R	M	R	F	T	E	D	N	G
Query Conservation																						.															.	.	.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence																						.															.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		E	I	L	E	M	H	G	L	R	R	I	I	F	D	K	M	T	K	A	K	Q	I	M	P	H	F	T	V	M	E	E	V	D	V	T	S	M	V	S	I	L	D	S	A	K	A	R	N	R	K	V	T	V	T	G	F	L	A	R	I	V	P	S	I	L	K	Q	Y	P	Y	L	N	A	I	Y	D	E	T	R	R
Template Known Secondary structure																			T					S											T											T	S	S	S																		T	T	S	G	G	G	S	B				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		68	.	70	.	.	.	.											.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Query Sequence		E	V	W	Q	W	V	D	.	.	.	.	.	.	.	.	.	.	D	A	L	T	F	E	L	P	E	I	I	D	L	R	T	N	I	D	P	H	G	T	A	Q	A	L	M	Q	A	D	L	Q	Q	D	L	R	V	D	S	G	K	P	L	V	F	H	Q	L	I	Q	V	A	D	N	R	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																									.															.	.	.	.	.	.	.	.
Template Conservation																																																											.
Template Sequence		V	Y	I	L	K	K	Y	Y	N	I	G	I	A	V	D	T	P	D	G	L	N	V	F	V	I	K	D	A	D	R	K	S	M	V	E	I	S	A	E	I	S	D	K	A	S	R	A	R	E	N	K	L	Q	L	D	E	V	.	Q	D	S	T	F	T	I	T	N	V	G	T	I	G	G	I	M	S	T	P	I	I
Template Known Secondary structure					B		S	S								B		S	S	S	B						T	T	T	T	T	S																		T	T				G	G	G	G	.	S										T	T	T			S
Template Predicted Secondary structure																																																											.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
																							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Y	W	Y	Q	R	Y	H	H	L	L	V	D	G	F	S	F	P	A	I	T	R	Q	I	A	N	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	P	E	V	A	I	L	G	V	H	R	I	L	E	R	E	G	R	K	Y	M	Y	L	S	L	S	C	D	H	R	L	I	D	G	A	V	A	T	R	F	I	V	D	L	K	K	V
Template Known Secondary structure			T	T	S	S											S	S	S	S											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions