 |
Job Description | P11454 | Confidence | 88.35% | Date | Thu Jan 5 11:32:39 GMT 2012 |
Rank | 322 | Aligned Residues | 94 |
% Identity | 16% | Template | c3nuzF_ |
PDB info |
PDB header:hydrolase | Chain: F: PDB Molecule:putative acetyl xylan esterase; |
PDBTitle: crystal structure of a putative acetyl xylan esterase (bf1801) from2 bacteroides fragilis nctc 9343 at 2.30 a resolution
|
Resolution | 2.30 Å |
|
 |
  |   |
1057 | . | . | 1060 | . | |
. | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
. | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | |
|
|
|
Predicted Secondary structure |   |
 |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
I | L | P | L | R | . |
E | G | N | G | P | T | L | F | C | F | H | P | A | S | G | F | A | W | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | S | V | L | S | R | Y | L | . |
D | P | Q | W | S | I | I | G | I | Q | S | P | R | P | N | G | P | M | Q | T | A | A | N | L | . |
. |
. |
. |
Query Conservation |   |
|   |   |   |   | . |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
| . |   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |
|   |   |   |   |
|
|   |
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | I | P | D | N | I | N | K | P | V | P | A | I | L | C | I | P | G | S | G | G | N | K | E | G | L | A | G | E | P | G | I | A | P | K | L | N | D | R | Y | K | D | P | K | L | T | Q | A | L | N | F | V | K | E | G | Y | I | A | V | A | V | D | N | P | A | A | G | E | A | S | D | L | E | R | Y | T | L | G | S | N |
Template Known Secondary structure |   |
 |  |  | S | S |
|
| S |
|  |  |  |  |  |  |  |
|
| S | S |
|
|  |  |  |  | T | T |
|
|
| S | S | G | G | G |
|
|
| T | T |
| T | T | T |
|  |  |  |  |  |  | T | T | T |
|  |  |  |  |
|
|
| T | T | S | G | G | G |
|
| S | S | T | T | T | T | T | T |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1113 | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | |
|
|
|
|
. | |
|
|
. | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
| . | . | . |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | V | C | E | A | H | L | A | T | L | L | E | Q | Q | . |
. |
. |
. |
. |
P | . |
. |
. |
H | G | P | Y | Y | L | L | G | Y | S | L | G | G | T | L | A | Q | G | I | A | A | R |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . |
| . | . | . |   |
|
|
|   |
|   |
|   |
|   |
|
|   |
|
|   |
|   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|
Template Sequence |   |
Y | D | Y | D | V | V | S | R | Y | L | L | E | L | G | W | S | Y | L | G | Y | A | S | Y | L | D | X | Q | V | L | N | W | X | K | T | Q | K | H | I | R | K | D | R | I | V | V | S | G | F | S | L | G | T | E | P | X | X | V | L | G | T | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|