 |
Job Description | P11454 | Confidence | 90.37% | Date | Thu Jan 5 11:32:39 GMT 2012 |
Rank | 316 | Aligned Residues | 81 |
% Identity | 15% | Template | c3n2zB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:lysosomal pro-x carboxypeptidase; |
PDBTitle: the structure of human prolylcarboxypeptidase at 2.80 angstroms2 resolution
|
Resolution | 2.79 Å |
|
 |
  |   |
1062 | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | N | G | P | T | L | F | C | F | H | P | A | S | G | F | A | W | Q | F | S | . |
. |
. |
. |
. |
. |
. |
V | L | S | R | Y | L | D | P | Q | W | S | I | I | G | I | Q | S | P | R | P | N | G | P | M | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | A | A | N | L | D | E | V | C | E | A | H | L | A | T |
Query Conservation |   |
  |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   | . | . |   |
|   |   |
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|
|
|
|
|
|   |
|
Template Sequence |   |
K | K | N | G | G | S | I | L | F | Y | T | G | N | E | G | D | I | I | W | F | C | N | N | T | G | F | M | W | D | V | A | E | E | L | . |
. |
K | A | M | L | V | F | A | E | H | R | Y | Y | G | E | S | L | P | F | G | D | N | S | F | K | D | S | R | H | L | N | F | L | T | S | E | Q | A | L | A | D | F | A | E | L |
Template Known Secondary structure |   |
| T | T | T |
|  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | . | . | T |  |  |  |  |  |  |
|
| T | T | S | T | T |
|
| T | T | G | G | G | G | G | S |
| T | T | T | S | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |
  |   |
1123 | . | . | . | . | |
|
|
|
|
|
. | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | E | Q | Q | . |
. |
. |
. |
. |
. |
P | H | G | P | Y | Y | L | L | G | Y | S | L | G | G | T | L | A |
Query Conservation |   |
|   |   |   |   | . | . | . | . | . | . |
|   |
|
|
|   |
|   |
|   |
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|   |
|
|
Template Sequence |   |
I | K | H | L | K | R | T | I | P | G | A | E | N | Q | P | V | I | A | I | G | G | S | Y | G | G | M | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | T | T | G | G | G |
|
|  |  |  |  |  |  | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|