Job Description P11454 Confidence 99.56% Date Thu Jan 5 11:32:39 GMT 2012 Rank 63 Aligned Residues 242 % Identity 16% Template c3l80A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein smu.1393c; PDBTitle: crystal structure of smu.1393c from streptococcus mutans ua159 Resolution 2.00 Å

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		1044	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.			.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110				.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																																				.	.	.
Query SS confidence																																		.	.																																				.	.	.
Query Sequence		A	E	E	D	S	T	R	R	M	G	F	E	T	I	L	P	L	R	E	G	N	G	P	T	L	F	C	F	H	P	A	S	.	.	G	F	A	W	Q	F	S	V	L	S	R	Y	L	D	P	Q	W	S	I	I	G	I	Q	S	P	R	P	N	G	P	M	Q	T	A	A	.	.	.	N	L	D	E	V	C	E	A
Query Conservation																																		.	.																																				.	.	.
Alig confidence																																		.	.																																				.	.	.
Template Conservation
Template Sequence		A	L	N	K	E	X	V	N	T	L	L	G	P	I	Y	T	C	H	R	E	G	N	P	C	F	V	F	L	S	G	A	G	F	F	S	T	A	D	N	F	A	N	I	I	D	K	L	P	D	S	I	G	I	L	T	I	D	A	P	N	S	G	Y	S	P	V	S	N	Q	A	N	V	G	L	R	D	W	V	N	A
Template Known Secondary structure											T	T	S										S	S								S	S	S							T					T	T	S		T	T	S								T	T	S	T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		1119	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.					1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		H	L	A	T	L	L	E	Q	Q	P	H	G	P	Y	Y	L	L	G	Y	S	L	G	G	T	L	A	Q	G	I	A	A	R	L	R	A	R	G	E	Q	V	A	F	L	G	L	L	D	T	W	P	P	.	.	.	.	E	T	Q	N	W	Q	E	K	E	A	N	G	L	D	P	E	V	L	A	E	I	N	R	E	R
Query Conservation																																																					.	.	.	.
Alig confidence										.																								.	.	.																	.	.	.	.
Template Conservation										.																								.	.	.
Template Sequence		I	L	X	I	F	E	H	F	.	K	F	Q	S	Y	L	L	C	V	H	S	I	G	G	F	A	A	L	Q	I	X	N	Q	.	.	.	S	S	K	A	C	L	G	F	I	G	L	E	P	T	T	V	X	I	Y	R	A	G	F	S	S	D	L	Y	P	Q	L	A	L	R	R	Q	K	L	K	T	A	A	D	R	L
Template Known Secondary structure									S	.			S								T	T												.	.	.		S	S									S											T	T	S	S	S	S									T			S
Template Predicted Secondary structure										.																								.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		1195	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.																			.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	F	L	A	A	Q	Q	G	S	T	S	T	E	L	F	T	T	I	E	G	N	Y	A	D	A	V	R	L	L	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	V	P	F	D	G	K	A	T	L	F	V	A	E	R	T	L	Q	E	G	M	S	P	E	R	A	W	S
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																																																						.	.
Template Sequence		N	Y	L	K	D	L	S	R	S	H	F	S	S	Q	Q	F	K	Q	L	W	R	G	Y	D	Y	C	Q	R	Q	L	N	D	V	Q	S	L	P	D	F	K	I	R	L	A	L	G	E	E	D	F	K	T	G	I	S	E	K	I	P	S	I	V	F	S	E	S	F	R	.	.	E	K	E	Y	L	E	S	E	Y	L
Template Known Secondary structure												S																					T	T	T	T	S	T	T			S	S					G	G	G	G						T	T	S								G	G	G	.	.						T	S	T	T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.
		1257	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	I	A	E	L	D	I	Y	R	Q	D	C	A	H	V	D	I	I	S	P	G	T	F	E	K	I	G	P	I	I	R	A	T	L	N	R
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		N	K	H	T	Q	T	K	L	I	L	C	G	Q	H	H	Y	L	H	W	S	E	T	.	.	N	S	I	L	E	K	V	E	Q	L	L	S	N
Template Known Secondary structure					T	T								S	S	S								.	.													T
Template Predicted Secondary structure																								.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions