Job Description P11454 Confidence 47.62% Date Thu Jan 5 11:32:39 GMT 2012 Rank 374 Aligned Residues 30 % Identity 20% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1131	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	Y	L	L	G	Y	S	L	G	G	T	L	A	Q	G	I	A	A	R	L	R	A	R	G	E	Q	V	A	F	L	G	L	L	D	T
Query Conservation
Alig confidence									.	.	.																		.	.	.
Template Conservation									.	.	.																		.	.	.
Template Sequence		K	V	I	I	I	G	G	.	.	.	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	G	.	.	.	V	V	I	I	N	K
Template Known Secondary structure									.	.	.														T	T			.	.	.						S
Template Predicted Secondary structure									.	.	.																		.	.	.
Template SS confidence
		2	.	.	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions