 |
Job Description | P11454 | Confidence | 86.84% | Date | Thu Jan 5 11:32:39 GMT 2012 |
Rank | 325 | Aligned Residues | 86 |
% Identity | 17% | Template | c3iumA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:prolyl endopeptidase; |
PDBTitle: appep_wtx opened state
|
Resolution | 2.25 Å |
|
 |
  |   |
1062 | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | N | G | P | T | L | F | C | F | H | P | A | S | G | F | A | W | Q | . |
. |
. |
. |
. |
. |
F | S | V | L | S | R | Y | L | D | P | Q | W | S | I | I | G | I | Q | S | P | R | P | N | G | . |
. |
. |
. |
. |
. |
P | M | Q | T | A | A | N | L | D | E | V | C | E | A | H | L | A | T | L | L | E | Q | Q | P | H |
Query Conservation |   |
  |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   | . | . | . |
|   |   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
D | G | S | N | P | T | I | L | Y | G | Y | G | G | F | D | V | S | L | T | P | S | F | S | V | S | V | A | N | W | L | D | L | . |
. |
. |
G | G | V | Y | A | V | A | N | L | R | G | G | G | E | Y | G | Q | A | W | H | L | A | G | T | Q | Q | N | K | Q | N | V | F | D | D | F | I | A | A | A | E | Y | L | K | A | E |
Template Known Secondary structure |   |
S | S |
|
|
|  |  |  |  |
|
|
| B | T | T | B |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | T | . | . | . | T |
|  |  |  |  |  |
|
| T | T | S | S | S | S |
|  |  |  |  |  | T | T | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
448 | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | |
|
|
480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . |
  |
  |   |
1130 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 |
Predicted Secondary structure |   |
| . | . | . | . | . |
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | . |
. |
. |
. |
. |
P | Y | Y | L | L | G | Y | S | L | G | G | T | L | A | Q | G | I | A | A | R |
Query Conservation |   |
| . | . | . | . | . |
|
|   |
|   |
|   |
|   |
|
|   |
|
|   |
|   |
|   |   |
Alig confidence |   |
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
G | Y | T | R | T | D | R | L | A | I | R | G | G | S | N | G | G | L | L | V | G | A | V | X | T | Q |
Template Known Secondary structure |   |
T | S |
|
| G | G | G |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
525 | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|