Return to main results Retrieve Phyre Job Id

Job DescriptionP11454
Confidence86.84%DateThu Jan 5 11:32:39 GMT 2012
Rank325Aligned Residues86
% Identity17%Templatec3iumA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1062.......1070.........1080 .........1090.........1100.... .....1110.........1120.........
Predicted Secondary structure 











......










......









Query SS confidence 


















. . . . . .























. . . . . .
























Query Sequence  EGNGPTLFCFHPASGFAWQ. . . . . . FSVLSRYLDPQWSIIGIQSPRPNG. . . . . . PMQTAANLDEVCEAHLATLLEQQPH
Query Conservation   
    

  
   
    ......
  
   
     



  
    ......       
   
  
   
    
 
Alig confidence 


















......






...













......
























Template Conservation      
 

  



       
      
   ...
  
   
 


 
 
  
              
 
     
   
Template Sequence  DGSNPTILYGYGGFDVSLTPSFSVSVANWLDL. . . GGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAE
Template Known Secondary structure  SS





BTTB






T...T


TTSSSS
TTSGGGT
Template Predicted Secondary structure 


















...
















Template SS confidence 















































































   448.450.........460.........470......... 480.........490.........500.........510.........520....
 
   1130 .........1140.........1150
Predicted Secondary structure 
.....

Query SS confidence 
. . . . .



















Query Sequence  G. . . . . PYYLLGYSLGGTLAQGIAAR
Query Conservation 
.....

 
 
 
 

 

 
 
  
Alig confidence 
.....



















Template Conservation 
  
  

 
 
 
 

 
       
Template Sequence  GYTRTDRLAIRGGSNGGLLVGAVXTQ
Template Known Secondary structure  TS

GGGT
Template Predicted Secondary structure 






Template SS confidence 

























   525....530.........540.........550
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions