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Job DescriptionP11454
Confidence100.00%DateThu Jan 5 11:32:39 GMT 2012
Rank22Aligned Residues445
% Identity20%Templatec3iplB_
PDB info PDB header:ligaseChain: B: PDB Molecule:2-succinylbenzoate--coa ligase; PDBTitle: crystal structure of o-succinylbenzoic acid-coa ligase from2 staphylococcus aureus subsp. aureus mu50
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   457..460.........470.........480.........490.........500.........510.........520.........530......
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Query Sequence  LSALVAEQAAKTPDAPALADARYLFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLD
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Template Conservation 
   
   
   

  

       

 

       
  
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Template Sequence  LDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRL. . . KAYQQSRVGLYIDNSIQSIILIHACWLANIEIAMIN
Template Known Secondary structure 


STTS
SS
...TT

S

SSTT


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   1........10.........20.........30.........40. ........50.........60.........70.......
 
   537..540.........550.........560.........570.........580.........590.........600.........610......
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Query Sequence  TGYPDDRLKMMLEDARPSLLITTDDQLPRFSDVPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVG
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Template Conservation         
   
       
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Template Sequence  TRLTPNEMTNQMRSIDVQLIFCTLPLELR. . . . . GFQIVSLDDIEFSPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQT
Template Known Secondary structure  TT

TT

SS



T.....TST

T




TTS

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   78.80.........90.........100...... ...110.........120.........130.........140.........150..
 
   617..620.........630.........640.........650.........660.........670.........680.........690......
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Query Sequence  QTAIVNRLLWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSM
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Template Conservation                                                     ...                          
Template Sequence  FRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIV. . . DKFNAEQILTMIKNERITHISLVPQT
Template Known Secondary structure  T


TT

S
TTST

...SS

TT


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   183......190.........200.........210.........220.........230... ......240.........250.........
 
   697..700.........710.........720.........730.........740.........750.........760.........770......
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Query Sequence  LAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIG
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Template Sequence  LNWLMQQ. . . . . GLHEPYNLQKILLGGAKLSATMIETALQY. NLPIYNSFGMTETCSQFLTATPEMLHARPD. . . . . TVG
Template Known Secondary structure  .....T

S
TT


SS


T.T

GGGT

TT.....
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   260...... ...270.........280.........290..... ....300.........310.........320..... ...
 
   777..780.........790.........800.........810.........820.........830.........840.........850......
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Query Sequence  YPVWNTGLRILDAMMHPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRS
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Template Conservation           
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Template Sequence  MPSANVDVKIKNP. . . . . NKEGHGELMIKGANVMNGYLYPTDLTGTFE. . . . . . . . NGYFNTGDIAEIDHEGYVMIYDRR
Template Known Secondary structure 
TT
S
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SSS
STTS
S

SB
S




........TT
TT




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   329330.........340. ........350.........360.........370. ........380.........390.....
 
   857..860.........870.........880.........890.........900.........910.........920.........930......
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Query Sequence  DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRETLPPHMVP
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Template Conservation 

 

  
  
 
 


  
   
 
  
 
 
      
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Template Sequence  KDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWG. . . . . . QVPKLYFVSESD. . ISKAQLIAYLSKHLAKYKVP
Template Known Secondary structure 
S
TT
STT
SSSS......SS
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S
TTTS
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   396...400.........410.........420.........430..... ....440....... ..450.........460.......
 
   937..940....
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Query Sequence  VVLLQLPQ
Query Conservation       
  
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Template Conservation       


Template Sequence  KHFEKVDT
Template Known Secondary structure  S


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   468.470.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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