Job Description P11454 Confidence 99.96% Date Thu Jan 5 11:32:39 GMT 2012 Rank 47 Aligned Residues 239 % Identity 18% Template c3hguB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:ehpf; PDBTitle: structure of phenazine antibiotic biosynthesis protein Resolution 1.95 Å

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		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.				.	.	.	.	.	.	.	640	.	.	.	.	.	.		.	.	.	650	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.															.
Query SS confidence																																																					.	.	.															.
Query Sequence		T	P	Q	G	S	A	P	L	Q	L	S	Q	P	H	H	T	A	Y	I	I	F	T	S	G	S	T	G	R	P	K	G	V	M	V	G	Q	T	A	I	V	N	R	L	L	W	M	Q	N	H	Y	P	.	.	.	L	T	G	E	D	V	V	A	Q	K	T	P	C	S	.	F	D	V	S	V	W	E	F	F	W	P
Query Conservation																																																					.	.	.															.
Alig confidence																																																					.	.	.															.
Template Conservation
Template Sequence		C	L	R	Q	E	P	V	A	N	L	V	P	Q	G	L	P	A	D	S	H	P	Q	V	Y	E	S	G	A	P	K	Y	V	V	A	Y	D	A	W	I	E	A	L	I	S	W	R	M	S	G	Y	Q	H	R	P	G	R	P	S	G	N	T	L	A	A	I	P	T	G	P	H	I	V	G	A	I	N	K	E	R	A
Template Known Secondary structure		G	T	T	T	S		G	G	G	G	S		T	T	S		T	T																													T	S	T	T	T	S	S	T	T										S			T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		658	.	660	.	.	.	.	.	.	.	.																				.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	A	G	A	K	L	V	M	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A	H	R	D	P	L	A	M	Q	Q	F	F	A	E	Y	G	V	T	T	T	H	F	V	P	S	M	L	A	A	F	V	A	S	L	T	P	Q	T	A	R	Q	S	C	A	T	L	K	Q
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation																																																																						.	.
Template Sequence		L	R	L	G	G	M	F	F	S	I	D	I	D	P	R	W	V	K	R	S	L	S	E	G	D	T	A	T	V	R	K	Y	T	H	H	L	V	D	Q	V	Q	N	T	L	M	N	Q	D	I	R	F	L	V	T	T	P	P	V	L	R	E	L	L	K	R	P	E	V	.	.	V	L	Q	M	K	Q	S	L	A	Q
Template Known Secondary structure				T	T	S																		T	T																							S																T	T	S				.	.									S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.			.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790		.	.	.	.	.
Predicted Secondary structure																						.	.																																																					.
Query SS confidence																						.	.																																																					.
Query Sequence		V	F	C	S	G	E	A	L	P	A	D	L	C	R	E	W	Q	Q	L	T	.	.	G	A	P	L	H	N	L	Y	G	P	T	E	A	A	V	D	V	S	W	Y	P	A	F	G	E	E	L	A	Q	V	R	G	S	S	V	P	I	G	Y	P	V	W	N	T	G	L	R	I	L	D	A	M	.	M	H	P	V	P
Query Conservation																						.	.																																																					.
Alig confidence																						.	.																														.	.	.	.	.	.																		.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		I	T	L	G	G	T	E	L	N	L	D	E	I	K	F	I	A	S	E	I	L	P	D	C	E	F	S	A	S	Y	G	S	T	S	A	L	G	V	S	R	S	L	L	I	T	S	E	S	Q	Q	V	.	.	.	.	.	.	I	Y	D	S	F	S	P	F	I	T	Y	D	V	V	D	S	I	T	A	Q	T	V	E
Template Known Secondary structure						S	S														T		T	T										G	G	G	T										T	T			S		.	.	.	.	.	.						T	T	T								T	T	T			B
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.							.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		796	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	V	A	G	D	L	Y	L	T	G	I	Q	L	A	Q	G	Y	L	G	R	P	D	L	T	A	S	R	F	I	A	D	P	F	A	P	G	E	R	M	Y	R	T	G	D	V	A	R	W	L	D	N	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		Y	G	E	R	G	N	V	I	V	T	.	.	.	.	.	.	.	.	.	.	.	.	H	L	S	P	W	A	F	Y	P	R	.	.	.	.	.	.	.	.	V	A	E	R	D	T	A	I	R	L	P	G	V
Template Known Secondary structure		T	T									.	.	.	.	.	.	.	.	.	.	.	.				T	T						.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.													.	.	.	320	.	.	.	.	.	.									.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions