Return to main results Retrieve Phyre Job Id

Job DescriptionP11454
Confidence99.05%DateThu Jan 5 11:32:39 GMT 2012
Rank141Aligned Residues223
% Identity9%Templatec3gzjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:polyneuridine-aldehyde esterase; PDBTitle: crystal structure of polyneuridine aldehyde esterase2 complexed with 16-epi-vellosimine
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1065....1070.........1080.........1090. ........1100.........1110 .........1120.........1130.........1140
Predicted Secondary structure 












.












...






Query SS confidence 


























.


















. . .





























Query Sequence  GPTLFCFHPASGFAWQFSVLSRYLDPQ. WSIIGIQSPRPNGPMQTAA. . . NLDEVCEAHLATLLEQQPHGPYYLLGYSLG
Query Conservation     

  
   
    
  
   
   .  



  
          ... 
   
  
   
    
 


 
 
 
 
Alig confidence 


























.


















...





























Template Conservation   
 





       
      
   
  


 

 
 
 
                                     
Template Sequence  QKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFG
Template Known Secondary structure 



TT

GGGGTTTTT



TTSTT
S

GGG

STS
TT

T
Template Predicted Secondary structure 













































Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   1141........1150.........1160.........1170.........1180.........1190.. .......1200.
Predicted Secondary structure 



















...................

Query SS confidence 



















































. . . . . . . . . . . . . . . . . . .








Query Sequence  GTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINR. . . . . . . . . . . . . . . . . . . EREAFLAAQ
Query Conservation 
 

 
 
  
   
  
  
 


                           ...................         
Alig confidence 










...





































...................








Template Conservation     
       ...                                                                  
Template Sequence  GMSLGLAMETY. . . PEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKM
Template Known Secondary structure 
...GGG



TTS
TTGGGS
TTTTTT
SSSS

T
Template Predicted Secondary structure  ...



























Template SS confidence 















































































   90.........100 .........110.........120.........130.........140.........150.........160......
 
   1202.......1210....... ..1220.........1230.........1240.........1250.........1260......... 1270...
Predicted Secondary structure 




.......
























.
Query SS confidence 















. . . . . . .



















































.



Query Sequence  QGSTSTELFTTIEGNY. . . . . . . ADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQDC. AHVD
Query Conservation                  .......                       
             
           
 
. 
  
Alig confidence 















.......



















































.



Template Conservation                                          
 
 
 
  
               
      
  


  
Template Sequence  FQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADAMG
Template Known Secondary structure  STTS



B


TS



TTTGGGSTT
SSS
T

STT

S
Template Predicted Secondary structure 
























Template SS confidence 















































































   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   1274.....1280.........1290..
Predicted Secondary structure 



Query SS confidence 


















Query Sequence  IISPGTFEKIGPIIRATLN
Query Conservation   
        
  
   
 
Alig confidence 




..











Template Conservation    
 
..      
  


Template Sequence  MLSQP. . REVCKCLLDISD
Template Known Secondary structure  S..
Template Predicted Secondary structure 

..

Template SS confidence 


















   247..250. ........260...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions