Job Description P11454 Confidence 43.73% Date Thu Jan 5 11:32:39 GMT 2012 Rank 382 Aligned Residues 154 % Identity 10% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		939	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.														.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	Q	L	P	Q	L	P	L	S	A	N	G	K	L	D	R	K	A	L	P	L	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	Q	A	P	G	R	A	P	K	A	G	S	E	T	I	I	A	A	A	F	S	S	L	L	G	C	D	V	Q	D	A	D	A	D	F	F	A	L	G	G	H
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		S	L	V	A	L	I	T	P	M	N	Q	D	G	S	I	H	Y	E	Q	L	R	D	L	I	D	W	H	I	E	N	G	T	D	G	I	V	A	V	G	T	T	G	E	S	A	T	L	S	V	E	E	H	T	A	V	I	E	A	V	V	K	H	V	A	.	.	.	.	K	R	V	P	V	I	A	G	T	G	A	N
Template Known Secondary structure										B		T	T	S		B															T	T							S	S	T	T	T	T	G	G	G	S																	T	.	.	.	.	T	S	S									S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80
		1006	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.			.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.													.	.	.	.	.	.	1070	.
Predicted Secondary structure																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	A	M	K	L	A	A	Q	L	S	R	Q	V	A	R	Q	.	.	V	T	P	G	Q	V	M	V	A	S	T	V	A	K	L	A	T	I	I	D	A	E	E	D	S	T	R	R	M	G	F	E	T	I	L	P	L	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	N	G	P	T	L	F	C	F
Query Conservation																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	V	E	A	I	A	L	S	Q	A	A	E	K	A	G	A	D	Y	T	L	S	V	V	P	Y	Y	N	K	P	S	Q	E	G	I	Y	Q	H	F	K	T	I	A	E	A	T	S	I	P	M	I	I	Y	N	V	P	G	R	T	V	V	S	M	T	N	D	T	I	L	R	L	A	E	I	P	N	I	V	G	V
Template Known Secondary structure		S															T		S									S	S																	T			S												S	S											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		1072	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	A	S	G	F	A	W	Q	F	S	V	L	S	R	Y	L	D	P	Q	W	S	I	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	A	S	G	N	I	G	S	N	I	E	L	I	N	R	A	P	E	G	F	V	V	L	S
Template Known Secondary structure					S													S		T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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