Job Description P11454 Confidence 34.39% Date Thu Jan 5 11:32:39 GMT 2012 Rank 409 Aligned Residues 154 % Identity 10% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		939	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.														.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	Q	L	P	Q	L	P	L	S	A	N	G	K	L	D	R	K	A	L	P	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	K	A	Q	A	P	G	R	A	P	K	A	G	S	E	T	I	I	A	A	A	F	S	S	L	L	G	C	D	V	Q	D	A	D	A	D	F	F	A	L	G	G	H
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		V	F	P	Y	L	V	S	P	V	D	A	E	G	R	V	R	A	D	V	M	G	R	L	C	D	D	L	I	Q	A	G	V	H	G	L	T	P	L	G	S	T	G	E	F	A	Y	L	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	.	.	.	.	R	R	V	P	V	V	A	G	V	A	S	T
Template Known Secondary structure					B					B		T	T	S		B															T	T		S		B	B	T	T	S	G	G	G	T	G	G	G																		T	.	.	.	.	T	S	S		B							S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.
		1006	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.			.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.													.	.	.	.	.	.	1070	.
Predicted Secondary structure																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	A	M	K	L	A	A	Q	L	S	R	Q	V	A	R	Q	.	.	V	T	P	G	Q	V	M	V	A	S	T	V	A	K	L	A	T	I	I	D	A	E	E	D	S	T	R	R	M	G	F	E	T	I	L	P	L	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	N	G	P	T	L	F	C	F
Query Conservation																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	A	D	A	V	A	Q	A	K	L	Y	E	K	L	G	A	D	G	I	L	A	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L	A	E	H	P	R	I	R	Y	I
Template Known Secondary structure		S															T		S									S	S																			S	S								T	T	T		S	S												T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		1072	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	A	S	G	F	A	W	Q	F	S	V	L	S	R	Y	L	D	P	Q	W	S	I	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	A	S	T	N	T	G	R	L	L	S	I	I	N	R	C	G	D	A	L	Q	V	F	S
Template Known Secondary structure					S	S													G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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