Job Description P11454 Confidence 100.00% Date Thu Jan 5 11:32:39 GMT 2012 Rank 32 Aligned Residues 382 % Identity 21% Template c3e53A_ PDB info PDB header:ligase Chain: A: PDB Molecule:fatty-acid-coa ligase fadd28; PDBTitle: crystal structure of n-terminal domain of a fatty acyl amp2 ligase faal28 from mycobacterium tuberculosis Resolution 2.35 Å

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		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.										.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		T	T	L	S	A	L	V	A	E	Q	A	A	K	T	P	D	A	P	A	L	A	D	.	.	.	.	.	.	.	.	.	A	R	Y	L	F	S	Y	R	E	M	R	E	Q	V	V	A	L	A	N	L	L	R	E	R	G	V	K	P	G	D	S	V	A	V	A	L	P	R	S	V	F	L	T	L	A	L	H	A	I
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																										.
Template Conservation																																																										.
Template Sequence		R	S	L	P	A	A	L	R	A	C	A	R	L	Q	P	H	D	P	A	F	T	F	X	D	Y	E	Q	D	W	D	G	V	A	I	T	L	T	W	S	Q	L	Y	R	R	T	L	N	V	A	Q	E	L	S	R	C	G	.	S	T	G	D	R	V	V	I	S	A	P	Q	G	L	E	Y	V	V	A	F	L	G	A
Template Known Secondary structure															S	T	T	S									S	S		S	S																							T	T	S	S	.		T	T									S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	G	A	A	W	L	P	L	D	T	G	Y	P	D	D	R	L	K	M	M	L	E	D	A	R	P	S	L	L	I	T	T	D	D	Q	L	P	R	F	S	D	V	P	N	L	T	S	L	C	Y	N	A	P	L	T	P	Q	G	S	A	P	L	Q	L	S	Q	P	H	H	T	A	Y	I	I	F	T	S	G
Query Conservation
Alig confidence																	.	.	.																																						.	.	.	.	.	.	.																	.	.
Template Conservation																	.	.	.																																						.	.	.	.	.	.	.																	.	.
Template Sequence		L	Q	A	G	R	I	A	V	P	L	S	V	P	Q	R	.	.	.	S	D	S	V	L	S	D	S	S	P	V	A	I	L	T	T	S	S	A	V	D	D	V	V	Q	H	V	P	P	S	I	I	E	V	D	L	L	.	.	.	.	.	.	.	D	L	D	A	P	E	Y	P	S	T	A	Y	L	Q	Y	T	.	.
Template Known Secondary structure				T	T												.	.	.	T	T									S						T	T	T						T	T								G	G	G	S	.	.	.	.	.	.	.		T	T						S								.	.
Template Predicted Secondary structure																	.	.	.																																						.	.	.	.	.	.	.																	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.					.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
Predicted Secondary structure																														.	.	.	.																.
Query SS confidence																														.	.	.	.																.
Query Sequence		S	T	G	R	P	K	G	V	M	V	G	Q	T	A	I	V	N	R	L	L	W	M	Q	N	H	Y	P	L	.	.	.	.	T	G	E	D	V	V	A	Q	K	T	P	C	S	F	D	.	V	S	V	W	E	F	F	W	P	F	I	A	G	A	K	L	V	M	A	E	P	E	A	H	R	D	P	L	A	M	Q	Q
Query Conservation																														.	.	.	.																.
Alig confidence		.	.	.	.																									.	.	.	.																.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	P	A	G	V	V	X	S	H	Q	N	V	R	V	N	F	E	Q	L	X	S	G	Y	F	A	D	G	I	P	P	P	N	S	A	L	V	S	W	L	P	F	Y	H	D	X	G	L	V	I	G	I	C	A	P	I	L	G	G	Y	P	A	V	L	T	S	P	V	S	F	L	Q	R	P	A	R	W	X
Template Known Secondary structure		.	.	.	.																														T	T									T	T	S								T							T															T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.			710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.							.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure																															.	.																													.	.	.	.	.	.
Query SS confidence																															.	.																													.	.	.	.	.	.
Query Sequence		F	F	A	E	Y	G	V	T	T	T	H	F	V	P	S	M	L	A	A	F	V	A	S	L	T	P	Q	T	A	.	.	R	Q	S	C	A	T	L	K	Q	V	F	C	S	G	E	A	L	P	A	D	L	C	R	E	W	Q	Q	L	.	.	.	.	.	.	T	G	A	P	L	H	N	L	Y	G	P	T	E	A	A
Query Conservation																															.	.																													.	.	.	.	.	.
Alig confidence																															.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	X	A	S	D	F	H	A	F	S	A	A	P	N	F	A	F	E	L	A	A	R	R	T	T	D	D	D	X	A	G	R	D	L	G	N	I	L	T	I	L	S	G	S	E	R	V	Q	A	A	T	I	K	R	F	A	D	R	F	A	R	F	N	L	Q	E	R	V	I	R	P	S	Y	G	L	A	E	A	T
Template Known Secondary structure					S	S	S	S																				T	T	T	T	T	T				T	T								S	S	S															T	T	T			G	G	G								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.																	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	V	S	W	Y	P	A	F	G	E	E	L	A	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	S	S	V	P	I	G	Y	P	V	W	N	T	G	L	R	I	L	D	A	M	M	H	P	V	P	P	G	V	A	G	D	L	Y	L	T	G	I	Q	L	A	Q	G	Y	L	G	R
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	V	A	T	S	K	P	G	Q	P	P	E	T	V	D	F	D	T	E	S	L	S	A	G	H	A	K	P	C	A	G	A	T	S	L	I	S	Y	X	L	P	R	S	P	I	V	R	I	V	D	S	D	T	C	I	E	C	P	D	G	T	V	G	E	I	W	V	H	G	D	N	V	A	N	G	Y	W	Q	K
Template Known Secondary structure		S							T	T	S														T	T	B																	S	S	S							T	T	T	T					T	T	B								S	T	T	S				B	T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		817	.	.	820	.	.	.	.	.	.	.						.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		P	D	L	T	A	S	R	F	I	A	D	.	.	.	.	.	P	F	A	P	G	E	R	M	Y	R	T	G	D	V	A	R	W	L	D	N	G	A	V	E	Y	L	G
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																			.
Template Conservation																																				.
Template Sequence		P	D	E	S	E	R	T	F	G	G	K	I	V	T	P	S	P	G	T	P	E	G	P	W	L	R	T	G	D	S	G	F	V	T	.	D	G	K	X	F	I	I	G
Template Known Secondary structure											B			B	S			T	T						B											.	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.