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Job DescriptionP11454
Confidence99.14%DateThu Jan 5 11:32:39 GMT 2012
Rank115Aligned Residues226
% Identity11%Templatec3e3aA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:possible peroxidase bpoc; PDBTitle: the structure of rv0554 from mycobacterium tuberculosis
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1063......1070.........1080... ......1090.........1100.........1110.........1120.........1130.........1140
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Query Sequence  GNGPTLFCFHPASGFAWQFSV. . LSRYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLG
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Template Sequence  GTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTMVADTAALIETLDIAPARVVGVSMG
Template Known Secondary structure  SSS

TT

GGGGTTTTTT

TTSGGGTT

S

TT

ST
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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   1141........1150.........1160.........1170.........1180.........1190.........1200.........1210.........1220
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Query Sequence  GTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADA
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Template Sequence  AFIAQELMVVAP. . . ELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWI
Template Known Secondary structure 
G...GGS

SS

T




S
T
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   90.........100. ........110.........120.........130.........140.........150.........160......
 
   1221....... .1230.........1240.........1250.........1260......... 1270........
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Query Sequence  VRLLTTAH. . . . . . . . . . . . . . . . . . . . . SVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQDC. AHVDIISPG
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Template Conservation                                     
     
  
                          

    
 
Template Sequence  AMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERP
Template Known Secondary structure  S




TSS
SS

TT

S
TT
SSS
STTTT

TTS
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   12791280.........1290...
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Query Sequence  TFEKIGPIIRATLNR
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Template Sequence  . . EAVNTAMLKFFAS
Template Known Secondary structure  ..T
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   247..250.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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