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Job DescriptionP11454
Confidence98.44%DateThu Jan 5 11:32:39 GMT 2012
Rank207Aligned Residues173
% Identity14%Templatec3bdiA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uncharacterized protein ta0194; PDBTitle: crystal structure of predicted cib-like hydrolase (np_393672.1) from2 thermoplasma acidophilum at 1.45 a resolution
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1062.......1070.........1080.. .......1090.........1100.........1110 .........1120.........1130..
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Query Sequence  EGNGPTLFCFHPASGFAWQFS. . . VLSRYLDPQWSIIGIQSPRPNGPMQTAA. . . . . . NLDEVCEAHLATLLEQQPHGPY
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Template Sequence  DSNRRSIALFHGYSFTSXDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVA. RS
Template Known Secondary structure  TT



TT

GGGGGGGTTTT

TTSTTS


TTT

TT

TT
S.S
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   23......30.........40.........50.........60.........70.........80.........90......... 100.
 
   1133......1140.........1150.........1160.........1170.........1180.........1190.........1200.........1210..
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Query Sequence  YLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTT
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Template Sequence  VIXGASXGGGXVIXTTLQYP. . . DIVDGIIAVAPAWVESLKGD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
G...GGS

S
GGG.....................................
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   102.......110.........120. ........130.........140.
 
   1213......1220.........1230.........1240.........1250.........1260........ .1270.........1280.........1290.
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Query Sequence  IEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQD. CAHVDIISPGTFEKIGPIIRATL
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Template Sequence  . . . . . . . . . . . . . . . . XKKIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKP. . EEFVRITVDFL
Template Known Secondary structure  ................TT

S
TT
TTTTSTT
TT

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   142.......150.........160.........170.........180.........190.. .......200...
 
   1292.
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Query Sequence  NR
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Template Sequence  RN
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   204.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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