Job Description P11454 Confidence 98.08% Date Thu Jan 5 11:32:39 GMT 2012 Rank 224 Aligned Residues 227 % Identity 19% Template c2zshA_ PDB info PDB header:hormone receptor Chain: A: PDB Molecule:probable gibberellin receptor gid1l1; PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor Resolution 1.80 Å

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		1046	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.						.	1080	.	.	.	.	.	.	.	.	.	1090			.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.													.	.
Query SS confidence																																			.	.	.	.	.													.	.
Query Sequence		E	D	S	T	R	R	M	G	F	E	T	I	L	P	L	R	E	G	N	G	P	T	L	F	C	F	H	P	A	S	G	F	A	.	.	.	.	.	W	Q	F	S	V	L	S	R	Y	L	D	P	.	.	Q	W	S	I	I	G	I	Q	S	P	R	P	N	G	P	M	Q	T	A	A	N	L	D	E	V	C	E	A
Query Conservation																																			.	.	.	.	.													.	.
Alig confidence																																			.	.	.	.	.													.	.											.
Template Conservation																																																																.
Template Sequence		D	Q	E	Q	P	P	S	I	L	D	L	E	K	P	V	D	G	D	I	V	P	V	I	L	F	F	H	G	G	S	F	A	H	S	S	A	N	S	A	I	Y	D	T	L	C	R	R	L	V	G	L	C	K	C	V	V	V	S	V	N	Y	R	.	R	A	P	E	N	P	Y	P	C	A	Y	D	D	G	W	I	A
Template Known Secondary structure		T		S	S				T	T	S	T	T					S	S	S										S	T	T	T	S			T	T	B															T	S									.		T	T	T	S		T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		1119	1120	.	.	.	.	.			.	.	.	.	1130					.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.
Predicted Secondary structure									.	.						.	.	.	.
Query SS confidence									.	.						.	.	.	.
Query Sequence		H	L	A	T	L	L	E	.	.	Q	Q	P	H	G	.	.	.	.	P	Y	Y	L	L	G	Y	S	L	G	G	T	L	A	Q	G	I	A	A	R	L	R	A	R	G	E	Q	V	A	F	L	G	L	L	D	T	W	P	P	E	T	Q	N	W	Q	E	K	E	A	N	G	L	D	P	E	V	L	A	E	I	N	R
Query Conservation									.	.						.	.	.	.
Alig confidence									.	.						.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	W	V	N	S	R	S	W	L	K	S	K	K	D	S	K	V	H	I	F	L	A	G	D	S	S	G	G	N	I	A	H	N	V	A	L	R	A	G	E	S	G	I	D	V	L	G	N	I	L	L	N	P	M	F	G	G	N	E	R	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T		G	G	G			T	T	T	S	S									T															T	T	T										S						S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		1193	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.												.	.	.	.	.	1240	.	.	.	.	.			.	.	.	.	1250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		E	R	E	A	F	L	A	A	Q	Q	G	S	T	S	T	E	L	F	T	T	I	E	G	N	Y	A	D	A	V	R	L	L	T	T	A	H	S	V	P	F	D	G	.	.	.	.	.	.	.	.	.	.	.	K	A	T	L	F	V	A	E	R	T	L	.	.	Q	E	G	M	S	P	E	R	A	W	S	P	W	I
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence		.	.																																									.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation		.	.
Template Sequence		.	.	S	E	K	S	L	D	G	K	Y	F	V	T	V	R	D	R	D	W	Y	W	K	A	F	L	P	E	G	E	D	R	E	H	P	A	C	N	P	F	S	P	R	G	K	S	L	E	G	V	S	F	P	K	S	L	V	V	V	A	G	L	D	L	I	R	D	W	Q	L	A	Y	A	E	G	L	K	K	A	G
Template Known Secondary structure		.	.						T	T	T	S	S														S		T	T			T	T	S	T	T	T		T	T	S	T	T	S				T	T												T	T	S	T	T														T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		1260	.	.	.	.	.	.	.	.	.		1270	.	.	.	.	.	.	.			.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.
Predicted Secondary structure												.									.	.
Query SS confidence												.									.	.
Query Sequence		A	E	L	D	I	Y	R	Q	D	C	.	A	H	V	D	I	I	S	P	.	.	G	T	F	E	K	I	G	P	I	I	R	A	T	L	N
Query Conservation												.									.	.
Alig confidence												.									.	.
Template Conservation
Template Sequence		Q	E	V	K	L	M	H	L	E	K	A	T	V	G	F	Y	L	L	P	N	N	N	H	F	H	N	V	M	D	E	I	S	A	F	V	N
Template Known Secondary structure										T	T			T	T	T	T	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions