Return to main results Retrieve Phyre Job Id

Job DescriptionP11454
Confidence98.91%DateThu Jan 5 11:32:39 GMT 2012
Rank173Aligned Residues227
% Identity14%Templatec2xt0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:haloalkane dehalogenase; PDBTitle: dehalogenase dppa from plesiocystis pacifica sir-i
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1061........1070.........1080.........1090. ........1100..... ....1110.........1120.........1130......
Predicted Secondary structure 
















.







...










Query SS confidence 






























.













. . .






























Query Sequence  REGNGPTLFCFHPASGFAWQFSVLSRYLDPQ. WSIIGIQSPRPNGP. . . MQTAANLDEVCEAHLATLLEQQPHGPYYLLG
Query Conservation    
    

  
   
    
  
   
   .  



  
     ...      
   
  
   
    
 


 
 
Alig confidence 






























.













...






























Template Conservation       
 





              
   
  
   
  
 
 
                                  
Template Sequence  PRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVC
Template Known Secondary structure 
TT
S


TT

GGGGTTTTT


TTSTTS
S
GGG

T

S
Template Predicted Secondary structure 






































Template SS confidence 















































































   42.......50.........60.........70.........80.........90.........100.........110.........120.
 
   1137..1140.........1150.........1160.........1170.........1180.........1190.........1200.........1210.....
Predicted Secondary structure 



























.
Query SS confidence 














































































.
Query Sequence  YSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEG.
Query Conservation   
 

 

 
 
  
   
  
  
 


                                                  .
Alig confidence 













...





























































.
Template Conservation     
          ...       
                                                       
Template Sequence  QDWGGILGLTLPVD. . . RPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPF
Template Known Secondary structure 
TT...
TTSS



SSS
S
T
TT

STT

TT
Template Predicted Secondary structure 







...


















Template SS confidence 















































































   122.......130..... ....140.........150.........160.........170.........180.........190........
 
   1216...1220.........1230.........1240.........1250.........1260.. ...... .1270.
Predicted Secondary structure  ......................






















.
.

Query SS confidence  . . . . . . . . . . . . . . . . . . . . . .














































.





.


Query Sequence  . . . . . . . . . . . . . . . . . . . . . . NYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL. DIYRQD. CAH
Query Conservation  ......................                         
             
       .    
 .
 
Alig confidence  ......................














































.





.


Template Conservation                                           


 
 
  
                           

Template Sequence  PGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGH
Template Known Secondary structure  SSGGG
GGGGS

STTSTTT

S
TT
SSSSSTT



TT

S
Template Predicted Secondary structure 





















Template SS confidence 















































































   199200.........210.........220.........230.........240.........250.........260.........270........
 
   1272.......1280.........1290..
Predicted Secondary structure 



Query SS confidence 




















Query Sequence  VDIISPGTFEKIGPIIRATLN
Query Conservation     
        
  
   
 
Alig confidence 






..











Template Conservation      
 
..      
  
 
Template Sequence  FVQEHGE. . PIARAALAAFGQ
Template Known Secondary structure  SGGGG
..TT
Template Predicted Secondary structure 

..

Template SS confidence 




















   279280..... ....290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions