Job Description P11454 Confidence 99.23% Date Thu Jan 5 11:32:39 GMT 2012 Rank 100 Aligned Residues 294 % Identity 10% Template c2xr7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:malonyltransferase; PDBTitle: crystal structure of nicotiana tabacum malonyltransferase (ntmat1)2 complexed with malonyl-coa Resolution 3.10 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.																			.	.									.																				.
Query SS confidence																											.	.	.	.	.	.																			.	.									.																				.
Query Sequence		M	A	E	K	L	S	E	L	P	S	A	W	S	V	A	H	Y	V	E	L	T	G	E	V	D	.	.	.	.	.	.	S	P	L	L	A	R	A	V	V	A	G	L	A	Q	A	D	T	L	.	.	R	M	R	F	T	E	D	N	.	G	E	V	W	Q	W	V	D	D	A	L	T	F	E	L	P	E	I	I	.
Query Conservation																											.	.	.	.	.	.																			.	.									.																				.
Alig confidence																											.	.	.	.	.	.																			.	.									.																				.
Template Conservation
Template Sequence		Y	F	D	H	V	W	L	A	F	H	R	X	R	R	I	L	F	Y	K	L	P	I	S	R	P	D	F	V	Q	T	I	I	P	T	L	K	D	S	L	S	L	T	L	K	Y	Y	L	P	L	A	G	N	V	A	C	P	Q	D	W	S	G	Y	P	E	L	R	Y	V	T	G	N	S	V	S	V	I	F	S	E	S
Template Known Secondary structure						G	G	G	G	S															S						T														T	T	S	G	G	G	G	S						S	S	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
									86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	D	L	R	T	N	I	D	P	H	G	T	A	Q	A	L	M	Q	A	D	L	Q	Q	D	L	R	V	D	S	G	K	P	L	V	F	H	Q	L	I	Q	V	A	D	N	R	W	Y	W	Y	Q	R	Y	H	H	L	L	V	D	G	F	S	F	P	A	I	T	R	Q	I	A	N	I	Y	C
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	X	D	F	N	Y	L	I	G	Y	H	P	R	N	T	K	D	F	Y	H	F	V	P	Q	L	A	E	P	K	D	A	P	G	V	Q	L	A	P	V	L	A	I	Q	V	T	L	F	P	N	H	G	I	S	I	G	F	T	N	H	H	V	A	G	D	G	A	T	I	V	K	F	V	R	A	W	A	L	L	N	K
Template Known Secondary structure			S						T		S	S				G	G	G	G	G	G	G	S										T	T															T	T	T										T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	L	R	G	E	P	T	P	A	S	P	F	T	P	F	A	D	V	V	E	E	Y	Q	Q	Y	R	E	S	E	A	W	Q	R	D	A	A	F	W	A	E	Q	R	R	Q	L	P	P	P	A	S	L	S	P	A	P	L	P	G	R	S	A	S	A	D	I	L	R	L	K	L	E	F	T	D	G	E	F	R	Q
Query Conservation
Alig confidence																		.	.	.	.	.	.													.	.	.	.	.
Template Conservation																		.	.	.	.	.	.													.	.	.	.	.
Template Sequence		F	G	G	D	E	Q	F	L	A	N	E	F	I	P	F	Y	.	.	.	.	.	.	D	R	S	V	I	K	D	P	N	G	V	G	.	.	.	.	.	X	S	I	W	N	E	X	K	K	Y	K	H	X	X	K	X	S	D	V	V	T	P	P	D	K	V	R	G	T	F	I	I	T	R	H	D	I	G	K	L	K
Template Known Secondary structure		T	T	T		G	G	G	S		G	G	G	S		B		.	.	.	.	.	.			S	S	S			S	S				.	.	.	.	.			T	T	T	T	G	G	G		T	T	T	S			S							S
Template Predicted Secondary structure																		.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		239	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.									.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure									.	.	.	.	.																		.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence									.	.	.	.	.																		.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		L	A	T	Q	L	S	G	.	.	.	.	.	V	Q	R	T	D	L	A	L	A	L	A	A	L	W	L	G	R	.	.	.	.	.	.	.	.	L	C	N	R	M	D	Y	A	A	G	F	I	F	M	R	R	.	.	.	L	G	S	A	A	L	T	A	T	G	P	V	L	N	V	L	P	L	G	I	H	I	A	A
Query Conservation									.	.	.	.	.																		.	.	.	.	.	.	.	.																	.	.	.
Alig confidence									.	.	.	.	.																		.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		N	L	V	L	T	R	R	P	K	L	T	H	V	T	S	F	T	V	T	C	A	Y	V	W	T	C	I	I	K	S	E	A	A	T	G	E	E	I	D	E	N	G	X	E	F	F	G	C	A	A	D	C	R	A	Q	F	N	P	P	L	P	P	S	Y	F	G	N	A	L	V	G	Y	V	A	R	T	R	Q	V	D
Template Known Secondary structure								S				S																							T	T					T	T	S										T	T	S		S	S	S				T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
					303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Q	E	T	L	P	E	L	A	T	R	L	A	A	Q	L	K	K	M
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	A	G	K	E	G	F	T	I	A	V	E	L	I	G	E	A	I	R	K	R
Template Known Secondary structure			T	S	S	S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions