Job Description P11454 Confidence 100.00% Date Thu Jan 5 11:32:39 GMT 2012 Rank 16 Aligned Residues 478 % Identity 21% Template c2v7bB_ PDB info PDB header:ligase Chain: B: PDB Molecule:benzoate-coenzyme a ligase; PDBTitle: crystal structures of a benzoate coa ligase from2 burkholderia xenovorans lb400 Resolution 1.84 Å

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		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	S	A	L	V	A	E	Q	A	A	K	T	P	D	A	P	A	L	A	D	A	R	Y	L	F	S	Y	R	E	M	R	E	Q	V	V	A	L	A	N	L	L	R	E	R	G	V	K	P	G	D	S	V	A	V	A	L	P	R	S	V	F	L	T	L	A	L	H	A	I	V	E	A	G	A	A	W	L	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	A	A	Y	L	F	R	L	N	E	T	R	A	G	K	T	A	Y	I	D	D	T	G	S	T	T	Y	G	E	L	E	E	R	A	R	R	F	A	S	A	L	R	T	L	G	V	H	P	E	E	R	I	L	L	V	M	L	D	T	V	A	L	P	V	A	F	L	G	A	L	Y	A	G	V	V	P	V	V	A
Template Known Secondary structure											T	G	G	G	T	T	S						S	S																						T	T			T	T									S	S	T													T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.							.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		D	T	G	Y	P	D	D	R	L	K	M	M	L	E	D	A	R	P	S	L	L	I	T	T	D	D	Q	L	P	R	F	.	.	.	.	.	.	S	D	V	P	N	L	T	S	L	C	Y	N	A	P	L	T	P	Q	G	S	A	P	L	Q	L	S	Q	P	H	H	T	A	Y	I	I	F	T	S	G	S	T	G	R
Query Conservation																																	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	L	L	T	P	A	D	Y	V	Y	M	L	T	H	S	H	A	R	A	V	I	A	S	G	A	L	V	Q	N	V	T	Q	A	L	E	S	A	G	C	Q	L	I	V	S	Q	P	L	A	P	L	F	E	E	L	I	D	A	A	A	P	A	A	K	A	A	A	T	G	C	D	D	I	A	F	W	L	Y	S	K
Template Known Secondary structure			T	T														T		S						G	G	G																								B								S				S	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	G	V	M	V	G	Q	T	A	I	V	N	R	L	L	W	M	Q	N	H	Y	P	L	T	G	E	D	V	V	A	Q	K	T	P	C	S	F	D	V	S	V	W	E	F	F	W	P	F	I	A	G	A	K	L	V	M	A	E	P	E	A	H	R	D	P	L	A	M	Q	Q	F	F	A	E	Y	G	V	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	G	T	V	H	T	H	A	N	L	Y	W	T	A	E	L	Y	A	K	P	I	L	G	I	A	E	N	D	V	V	F	S	A	A	K	L	F	F	A	Y	G	L	G	N	G	L	T	F	P	L	S	V	G	A	T	A	I	L	M	A	E	R	P	T	A	D	A	I	F	A	R	L	V	E	H	R	P	T	V
Template Known Secondary structure																			T									T	T						S	S		T	T	S								T							T								S														T			S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	F	V	P	S	M	L	A	A	F	V	A	S	L	T	P	Q	T	A	R	Q	S	C	A	T	L	K	Q	V	F	C	S	G	E	A	L	P	A	D	L	C	R	E	W	Q	Q	L	T	G	A	P	L	H	N	L	Y	G	P	T	E	A	A	V	D	V	S	W	Y	P	A	F	G	E	E	L	A	Q	V	R
Query Conservation
Alig confidence																			.	.																																																											.	.	.
Template Conservation																			.	.																																																											.	.	.
Template Sequence		F	Y	G	V	P	T	L	Y	A	N	M	L	V	S	P	N	L	.	.	P	A	R	A	D	V	A	I	R	I	C	T	S	A	G	E	A	L	P	R	E	I	G	E	R	F	T	A	H	F	G	C	E	I	L	D	G	I	G	S	T	E	M	L	H	I	F	L	S	N	R	A	G	A	V	E	Y	G	.	.	.
Template Known Secondary structure														T		T	T		.	.			G	G	G										S	S															S										T	T	T	S	S							T	T				T	T	.	.	.
Template Predicted Secondary structure																			.	.																																																											.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	S	V	P	I	G	Y	P	V	W	N	T	G	L	R	I	L	D	A	M	M	H	P	V	P	P	G	V	A	G	D	L	Y	L	T	G	I	Q	L	A	Q	G	Y	L	G	R	P	D	L	T	A	S	R	F	I	A	D	P	F	A	P	G	E	R	M	Y	R	T	G	D	V	A	R	W	L	D	N	G	A
Query Conservation
Alig confidence		.	.	.	.																																																						.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																						.	.	.	.	.	.	.
Template Sequence		.	.	.	.	T	T	G	R	P	V	P	G	Y	E	I	E	L	R	D	E	A	G	H	A	V	P	D	G	E	V	G	D	L	Y	I	K	G	P	S	A	A	V	M	Y	W	N	N	R	E	K	S	R	A	T	F	L	G	.	.	.	.	.	.	.	E	W	I	R	S	G	D	K	Y	C	R	L	P	N	G	C
Template Known Secondary structure		.	.	.	.	S						T	T								T	T	S		B			T	T	S									T	T					B	T	T											T	.	.	.	.	.	.	.	T												T	T	S
Template Predicted Secondary structure		.	.	.	.																																																						.	.	.	.	.	.	.
Template SS confidence
						353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.								.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.				.	.	.	920	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		V	E	Y	L	G	R	S	D	D	Q	L	K	I	R	G	Q	R	I	E	L	G	E	I	D	R	V	M	Q	A	L	P	D	V	E	Q	A	V	T	H	A	C	V	I	N	Q	A	A	A	T	G	G	D	A	R	Q	L	V	G	Y	L	V	S	Q	S	G	L	P	.	.	.	L	D	T	S	A	L	Q	A	Q	L
Query Conservation																																																																					.	.	.
Alig confidence														.	.	.	.																																.	.	.	.	.	.	.														.	.	.
Template Conservation														.	.	.	.																																.	.	.	.	.	.	.
Template Sequence		Y	V	Y	A	G	R	S	D	D	M	L	K	.	.	.	.	Y	V	S	P	V	E	V	E	M	V	L	V	Q	H	D	A	V	L	E	A	A	V	V	G	V	D	H	G	G	L	V	.	.	.	.	.	.	.	K	T	R	A	F	V	V	L	K	R	E	F	A	P	S	E	I	L	A	E	E	L	K	A	F	V
Template Known Secondary structure								G	G	G		B		.	.	.	.		B										T	T	S	T	T												T	T			.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure														.	.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.					.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.								.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		927	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	T	L	P	P	H	M	V	P	V	V	L	L	Q	L	P	Q	L	P	L	S	A	N	G	K	L	D	R	K	A	L	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	R	L	A	P	H	K	Y	P	R	D	I	V	F	V	D	D	L	P	K	T	A	T	G	K	I	Q	R	F	K	L	R	E
Template Known Secondary structure			T	T	S		T	T	S	S		S						S				B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.