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Job DescriptionP11454
Confidence98.76%DateThu Jan 5 11:32:39 GMT 2012
Rank186Aligned Residues220
% Identity12%Templatec2ockA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:valacyclovir hydrolase; PDBTitle: crystal structure of valacyclovir hydrolase d123n mutant
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1062.......1070.........1080.........1090. ........1100.........1110 .........1120.........1130......
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Query Sequence  EGNGPTLFCFHPASGFAWQFSVLSRYLDPQ. WSIIGIQSPRPNGPMQTAA. . . . NLDEVCEAHLATLLEQQPHGPYYLLG
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Template Sequence  EGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLG
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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   1137..1140.........1150.........1160.........1170.........1180.........1190.........1200.........1210......
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Query Sequence  YSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGN
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Template Sequence  WSNGGITALIAAAKY. . . PSYIHKMVIWGANA. . . . . . YVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEK
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   121........130..... ....140......... 150.........160.........170.........180.........190.
 
   1217..1220....... ..1230.........1240.........1250.........1260......... 1270.........1280.......
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Query Sequence  YADAVRLLTTA. . . . . . . . HSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQDC. AHVDIISPGTFEKIGPII
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Template Sequence  WVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFA. . DEFNKLA
Template Known Secondary structure  GGGGSGGGBSSTTTGGG

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   192.......200.........210.........220.........230.........240.........250.........260.. .......
 
   1288.1290..
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Query Sequence  RATLN
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Template Sequence  EDFLQ
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   270....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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