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Job DescriptionP11454
Confidence97.69%DateThu Jan 5 11:32:39 GMT 2012
Rank240Aligned Residues200
% Identity14%Templatec2hu7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acylamino-acid-releasing enzyme; PDBTitle: binding of inhibitors by acylaminoacyl peptidase
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1062.......1070..... ....1080........ .1090.........1100. ........1110.........1120........
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Query Sequence  EGNGPTLFCFHPAS. . GFAWQFSVLSRYL. DPQWSIIGIQSPR. . . . . . . . . . PNGPMQTAANLDEVCEAHLATLLEQQP
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Template Sequence  PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSA. AARWARESGL
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   357..360.........370.........380.........390.........400.........410.........420..... ....430.....
 
   11291130.........1140.........1150.........1160.........1170.........1180.........1190.........1200........
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Query Sequence  HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTE
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Template Sequence  ASELYIMGYSYGGYMT. . . LCALTMKPGLFKAGVAGASVVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . WEEMYELSDAA
Template Known Secondary structure  T...STTSSSS



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   436...440.........450. ........460.........470... ......480....
 
   12091210.........1220......... 1230.........1240.........1250......... 1260.........1270.........1280
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Query Sequence  LFTTIEGNYADAVRLLTTAHS. . . . VPFDGKATLFVAERTLQEGMSPERAWSPWI. . . . AELDIYRQDCAHVDIISPGTF
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Template Sequence  FRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDA
Template Known Secondary structure 
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   485....490.........500.........510.........520.........530.........540.........550.........560....
 
   1281........1290...
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Query Sequence  EKIGPIIRATLNR
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Template Sequence  VKILLPAVFFLAT
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   565....570.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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