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Job DescriptionP11454
Confidence100.00%DateThu Jan 5 11:32:39 GMT 2012
Rank44Aligned Residues242
% Identity19%Templatec2h7xA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:type i polyketide synthase pikaiv; PDBTitle: pikromycin thioesterase adduct with reduced triketide2 affinity label
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1035....1040.........1050.........1060....... ..1070... ......1080.........1090.........1100........
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Query Sequence  VAKLATIIDAEEDSTRRMGFETILPLREGNGPT. . . . LFCFHP. . ASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQT
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Template Sequence  LAEASAFRPQFASPEACSERLDPVLLAGGPTDEGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGGTA
Template Known Secondary structure  TTS

SGGG
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TT
STTTTTTTTT



TT

B

B
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   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   1109 1110.........1120.........1130.........1140.........1150.... .....1160.........1170.........1180.....
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Query Sequence  A. . ANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRAR. GEQVAFLGLLDTWPPETQNWQEKEANGLDPE
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Template Sequence  LLPADLDTALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ. . . . . . . . . . . . E
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SSTTS
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   117..120.........130.........140.........150.........160.........170.........180... .
 
   1186...1190.........1200.........1210.........1220.........1230.........1240.........1250.........1260. ...
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Query Sequence  VLAEINREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAE. LDI
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Template Sequence  PIEVWSRQLGEGLFAGELEPMS. . . DARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTV
Template Known Secondary structure  TT
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   185....190.........200...... ...210.........220.........230.........240.........250.........260.
 
   1265....1270.........1280.........1290..
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Query Sequence  YRQDCAHVDIISPGTFEKIGPIIRATLN
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Template Sequence  ADVPGDHFTMMR. DHAPAVAEAVLSWLD
Template Known Secondary structure  SS
TT.TT
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   262.......270... ......280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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