 |
Job Description | P11454 | Confidence | 98.94% | Date | Thu Jan 5 11:32:39 GMT 2012 |
Rank | 164 | Aligned Residues | 76 |
% Identity | 14% | Template | c2cnrA_ |
PDB info |
PDB header:lipid transport | Chain: A: PDB Molecule:acyl carrier protein; |
PDBTitle: structural studies on the interaction of scfas acp with2 acps
|
Resolution | UNK |
|
 |
  |   |
972 | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | |
|
. | . | . | . | . | . | . | . | 1000 | . | |
. | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |
|
|
|
|
|
|  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | K | A | G | S | E | T | I | I | A | A | A | F | S | S | L | L | G | C | D | . |
. |
V | Q | D | A | D | A | D | F | F | A | . |
L | G | G | H | S | L | L | A | M | K | L | A | A | Q | L | S | R | Q | V | A | R | Q | V | T | P | G | Q | V | M | V | A | S | T | V | A | K | L | A | T | I | I | D | A | E | E | D |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   | . | . |   |
|   |   |   |
|   |
|
|   | . |
|
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|
Template Sequence |   |
T | Q | E | E | I | V | A | G | L | A | E | I | V | N | E | I | A | G | I | P | V | E | D | V | K | L | D | K | S | F | T | D | D | L | D | V | D | S | L | S | M | V | E | V | V | V | A | A | E | E | R | F | D | V | K | I | P | D | D | D | V | K | N | L | K | T | V | G | D | A | T | K | Y | I | L | D | H | Q | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| T | T | T |
|
| T | T | S | B | T | T | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T | B |
|
|
| G | G | G | G | G | T |
| S | B |  |  |  |  |  |  |  |  |  |  | S | B |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|