Job Description P11454 Confidence 99.68% Date Thu Jan 5 11:32:39 GMT 2012 Rank 58 Aligned Residues 274 % Identity 14% Template c2bghA_ PDB info PDB header:transferase Chain: A: PDB Molecule:vinorine synthase; PDBTitle: crystal structure of vinorine synthase Resolution 2.6 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.
Predicted Secondary structure																																								.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		Q	H	L	P	L	V	A	A	Q	P	G	I	W	M	A	E	K	L	S	E	L	P	S	A	W	S	V	A	H	Y	V	E	L	T	G	E	V	D	.	.	.	.	.	.	S	P	L	L	A	R	A	V	V	A	G	L	A	Q	A	D	T	L	R	M	R	F	T	E	D	.	.	.	.	.	N	G	E	V	W	Q
Query Conservation																																								.	.	.	.	.	.																										.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																					.	.	.	.	.	.																										.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.
Template Sequence		K	C	Y	K	I	S	H	L	D	Q	.	.	.	.	.	.	.	.	L	L	L	T	C	H	I	P	F	I	L	F	Y	P	N	P	L	D	S	N	L	D	P	A	Q	T	S	Q	H	L	K	Q	S	L	S	K	V	L	T	H	F	Y	P	L	A	G	R	I	N	V	N	S	S	V	D	C	N	D	S	G	V	P
Template Known Secondary structure					B							.	.	.	.	.	.	.	.	T	S		S	S												S	S																				T	T	T	S	G	G	G	G	S				T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	D	D	A	L	T	F	E	L	P	E	I	I	D	L	R	T	N	I	D	P	H	G	T	A	Q	A	L	M	Q	A	D	L	Q	Q	D	L	R	V	D	S	G	K	P	L	V	F	H	Q	L	I	Q	V	A	D	N	R	W	Y	W	Y	Q	R	Y	H	H	L	L	V	D	G	F	S	F	P	A	I	T	R
Query Conservation
Alig confidence												.																																	.
Template Conservation												.																																	.
Template Sequence		F	V	E	A	R	V	Q	A	Q	L	.	S	Q	A	I	Q	N	V	V	E	L	E	K	L	D	Q	Y	L	P	S	A	A	Y	P	G	G	K	I	E	V	N	E	D	.	V	P	L	A	V	K	I	S	F	F	E	C	G	G	T	A	I	G	V	N	L	S	H	K	I	A	D	V	L	S	L	A	T	F	L	N
Template Known Secondary structure								S	S			.					S			S	S	G	G	G	G	G	G	G	S	S	S		S	S	S	S	S	S	S				T	T	.		S									T	T	S										T	T	T
Template Predicted Secondary structure												.																																	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	N	I	Y	C	T	W	L	R	G	E	P	T	P	A	S	P	F	T	P	F	A	D	V	V	E	E	Y	Q	Q	Y	R	E	S	E	A	W	Q	R	D	A	A	F	W	A	E	Q	R	R	Q	L	P	P	P	A	S	L	S	P	A	P	L	P	G	R	S	A	S	A	D	I	L	R	L	K	L	E	F
Query Conservation
Alig confidence									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	W	T	A	T	C	R	.	.	.	.	G	E	T	E	I	V	L	P	N	F	D	L	A	A	R	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	V	D	N	T	P	S	P	E	L	V	P	D	E	N	V	V	M	K	R	F	V	F	D	K
Template Known Secondary structure								T	.	.	.	.	T		S						B		S						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T										S	S
Template Predicted Secondary structure									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																											.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																		.	.	.	.	.																.	.	.
Query SS confidence																																		.	.	.	.	.																.	.	.
Query Sequence		T	D	G	E	F	R	Q	L	A	T	Q	L	S	G	V	Q	R	T	D	L	A	L	A	L	A	A	L	W	L	G	R	L	.	.	.	.	.	C	N	R	M	D	Y	A	A	G	F	I	F	M	R	R	.	.	.	L	G	S	A	A	L	T	A	T	G	P	V	L	N	V	L	P	L	G	I	H	I	A	A	Q
Query Conservation																																		.	.	.	.	.																.	.	.
Alig confidence															.																			.	.	.	.	.																.	.	.
Template Conservation															.
Template Sequence		E	K	I	G	A	L	R	A	Q	A	S	K	N	.	F	S	R	V	Q	L	V	V	A	Y	I	W	K	H	V	I	D	V	T	R	A	K	Y	G	A	K	N	K	F	V	V	V	Q	A	V	N	L	R	S	R	M	N	P	P	L	P	H	Y	A	M	G	N	I	A	T	L	L	F	A	A	V	D	A	E	W	D
Template Known Secondary structure											T				.																							S				S										S	G	G	G	S	S	S				T	T	B		S												T	T
Template Predicted Secondary structure															.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	P	E	L	A	T	R	L	A	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	F	P	D	L	I	G	P	L	R	T	S	L
Template Known Secondary structure				G	G	G	G								T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions