Job Description P11454 Confidence 99.07% Date Thu Jan 5 11:32:39 GMT 2012 Rank 138 Aligned Residues 109 % Identity 14% Template c1pjaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:palmitoyl-protein thioesterase 2 precursor; PDBTitle: the crystal structure of palmitoyl protein thioesterase-2 reveals the2 basis for divergent substrate specificities of the two lysosomal3 thioesterases (ppt1 and ppt2) Resolution 2.70 Å

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		1064	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090				.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110		.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																					.
Query SS confidence																													.	.	.																					.
Query Sequence		N	G	P	T	L	F	C	F	H	P	A	S	G	F	A	W	Q	F	S	V	L	S	R	Y	L	D	P	.	.	.	Q	W	S	I	I	G	I	Q	S	P	R	P	N	G	P	M	Q	T	A	A	.	N	L	D	E	V	C	E	A	H	L	A	T	L	L	E	Q	Q	P	H	G	P	Y	Y	L	L	G	Y	S	L
Query Conservation																													.	.	.																					.
Alig confidence																													.	.	.																					.																		.	.
Template Conservation																																																																						.	.
Template Sequence		S	Y	K	P	V	I	V	V	H	G	L	F	D	S	S	Y	S	F	R	H	L	L	E	Y	I	N	E	T	H	P	G	T	V	V	T	V	L	D	L	F	D	G	R	E	S	L	R	P	L	W	E	Q	V	Q	G	F	R	E	A	V	V	P	I	M	A	K	A	P	.	.	Q	G	V	H	L	I	C	Y	S	Q
Template Known Secondary structure												T	T			G	G	G	G											S	T	T								S	S		S	G	G	G	G	S																					T	.	.	T								T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.
		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	T	L	A	Q	G	I	A	A	R	L	R	A	R	G	E	Q	V	A	F	L	G	L	L	D	T	W	P	P	E	T	Q	N	W	Q	E	K
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		G	G	L	V	C	R	A	L	L	S	V	M	.	.	.	D	D	H	N	V	D	S	F	I	S	L	S	S	P	Q	M	G	Q	Y	G	D	T	D
Template Known Secondary structure														.	.	.	T	T										S			T	T		B		S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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