Email l.a.kelley@imperial.ac.uk Description P0ABF1 Date Thu Jan 5 11:15:21 GMT 2012 Unique Job ID 1a61aef27431177b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3aqnA_ 100.0 100 PDB header:transferase Chain: A: PDB Molecule:poly(a) polymerase; PDBTitle: complex structure of bacterial protein (apo form ii) 2 c1miyB_ 100.0 28 PDB header:translation, transferase Chain: B: PDB Molecule:trna cca-adding enzyme; PDBTitle: crystal structure of bacillus stearothermophilus cca-adding enzyme in2 complex with ctp 3 c1vfgB_ 100.0 24 PDB header:transferase/rna Chain: B: PDB Molecule:poly a polymerase; PDBTitle: crystal structure of trna nucleotidyltransferase complexed2 with a primer trna and an incoming atp analog 4 c3h37B_ 100.0 21 PDB header:transferase Chain: B: PDB Molecule:trna nucleotidyl transferase-related protein; PDBTitle: the structure of cca-adding enzyme apo form i 5 c1ou5A_ 100.0 26 PDB header:translation, transferase Chain: A: PDB Molecule:trna cca-adding enzyme; PDBTitle: crystal structure of human cca-adding enzyme 6 d1miwa2 100.0 38 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly A polymerase head domain-like 7 d1ou5a2 100.0 35 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly A polymerase head domain-like 8 d1vfga2 100.0 40 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly A polymerase head domain-like 9 d1miwa1 100.0 21 Fold:Poly A polymerase C-terminal region-like Superfamily:Poly A polymerase C-terminal region-like Family:Poly A polymerase C-terminal region-like 10 d1vfga1 100.0 18 Fold:Poly A polymerase C-terminal region-like Superfamily:Poly A polymerase C-terminal region-like Family:Poly A polymerase C-terminal region-like 11 d1ou5a1 100.0 19 Fold:Poly A polymerase C-terminal region-like Superfamily:Poly A polymerase C-terminal region-like Family:Poly A polymerase C-terminal region-like 12 c2la3A_ 96.7 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the nmr structure of the protein np_344798.1 reveals a cca-adding2 enzyme head domain 13 d2fcla1 91.6 22 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:TM1012-like 14 d2qgsa1 86.8 10 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 15 d2pq7a1 80.8 7 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 16 d1r89a2 69.0 20 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Archaeal tRNA CCA-adding enzyme catalytic domain 17 d3djba1 63.8 14 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 18 d1y81a1 58.2 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 19 d2d59a1 46.9 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 20 d1jmsa4 43.2 19 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 21 d1iowa1 not modelled 39.9 20 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:D-Alanine ligase N-terminal domain 22 c2q14A_ not modelled 38.4 7 PDB header:hydrolase Chain: A: PDB Molecule:phosphohydrolase; PDBTitle: crystal structure of phosphohydrolase (bt4208) from bacteroides2 thetaiotaomicron vpi-5482 at 2.20 a resolution 23 c3mdoB_ not modelled 34.9 32 PDB header:ligase Chain: B: PDB Molecule:putative phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of a putative phosphoribosylformylglycinamidine2 cyclo-ligase (bdi_2101) from parabacteroides distasonis atcc 8503 at3 1.91 a resolution 24 d1b7go1 not modelled 34.9 27 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 25 d2fmpa3 not modelled 33.0 26 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 26 c3skdA_ not modelled 31.0 11 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein tthb187; PDBTitle: crystal structure of the thermus thermophilus cas3 hd domain in the2 presence of ni2+ 27 c3fpnA_ not modelled 30.3 18 PDB header:dna binding protein Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction PDBTitle: crystal structure of uvra-uvrb interaction domains 28 d1n57a_ not modelled 29.2 17 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:DJ-1/PfpI 29 c2duwA_ not modelled 28.9 21 PDB header:ligand binding protein Chain: A: PDB Molecule:putative coa-binding protein; PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae 30 c1x60A_ not modelled 28.5 30 PDB header:hydrolase Chain: A: PDB Molecule:sporulation-specific n-acetylmuramoyl-l-alanine PDBTitle: solution structure of the peptidoglycan binding domain of2 b. subtilis cell wall lytic enzyme cwlc 31 c2pcnA_ not modelled 28.5 18 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine:2-demethylmenaquinone PDBTitle: crystal structure of s-adenosylmethionine: 2-dimethylmenaquinone2 methyltransferase (gk_1813) from geobacillus kaustophilus hta426 32 c2ze5A_ not modelled 28.0 13 PDB header:transferase Chain: A: PDB Molecule:isopentenyl transferase; PDBTitle: crystal structure of adenosine phosphate-isopentenyltransferase 33 d2bcqa3 not modelled 27.6 23 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 34 c3k4iC_ not modelled 27.0 18 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein pspto_3204 from2 pseudomonas syringae pv. tomato str. dc3000 35 d2bdua1 not modelled 26.9 21 Fold:HAD-like Superfamily:HAD-like Family:Pyrimidine 5'-nucleotidase (UMPH-1) 36 c3c8oB_ not modelled 24.9 32 PDB header:hydrolase regulator Chain: B: PDB Molecule:regulator of ribonuclease activity a; PDBTitle: the crystal structure of rraa from pao1 37 d1vi4a_ not modelled 24.9 27 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 38 d1no5a_ not modelled 24.0 25 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 39 d1clia2 not modelled 23.9 32 Fold:PurM C-terminal domain-like Superfamily:PurM C-terminal domain-like Family:PurM C-terminal domain-like 40 d1j3la_ not modelled 23.8 32 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 41 d2vana2 not modelled 23.5 26 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 42 d1q5xa_ not modelled 23.3 18 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 43 d1iuka_ not modelled 23.3 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain 44 c3m5fA_ not modelled 23.2 10 PDB header:hydrolase Chain: A: PDB Molecule:metal dependent phosphohydrolase; PDBTitle: structure of mj0384, a cas3 protein from methanocaldococcus jannaschii 45 c1nxjA_ not modelled 23.1 27 PDB header:unknown function Chain: A: PDB Molecule:probable s-adenosylmethionine:2- PDBTitle: structure of rv3853 from mycobacterium tuberculosis 46 d1nxja_ not modelled 23.1 27 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 47 c2c5qE_ not modelled 22.7 23 PDB header:structural genomics,unknown function Chain: E: PDB Molecule:rraa-like protein yer010c; PDBTitle: crystal structure of yeast yer010cp 48 c3a8tA_ not modelled 22.6 15 PDB header:transferase Chain: A: PDB Molecule:adenylate isopentenyltransferase; PDBTitle: plant adenylate isopentenyltransferase in complex with atp 49 d1wota_ not modelled 22.5 12 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 50 d2vkqa1 not modelled 22.2 19 Fold:HAD-like Superfamily:HAD-like Family:Pyrimidine 5'-nucleotidase (UMPH-1) 51 d1yt8a4 not modelled 21.9 20 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 52 c3d54I_ not modelled 21.3 22 PDB header:ligase Chain: I: PDB Molecule:phosphoribosylformylglycinamidine synthase ii; PDBTitle: stucture of purlqs from thermotoga maritima 53 c3g5jA_ not modelled 21.1 22 PDB header:nucleotide binding protein Chain: A: PDB Molecule:putative atp/gtp binding protein; PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630 54 c2w9mB_ not modelled 21.0 19 PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans 55 d2fuea1 not modelled 20.0 14 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 56 c3exaD_ not modelled 19.9 18 PDB header:transferase Chain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of the full-length trna2 isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41. 57 d1wpga2 not modelled 19.4 13 Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P 58 d1vk3a1 not modelled 18.7 53 Fold:Bacillus chorismate mutase-like Superfamily:PurM N-terminal domain-like Family:PurM N-terminal domain-like 59 c3d3qB_ not modelled 18.1 15 PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 60 c3ib6B_ not modelled 17.6 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from listeria2 monocytogenes serotype 4b 61 d2heka1 not modelled 17.4 17 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 62 c2zodB_ not modelled 16.7 18 PDB header:transferase Chain: B: PDB Molecule:selenide, water dikinase; PDBTitle: crystal structure of selenophosphate synthetase from2 aquifex aeolicus 63 c2cx9C_ not modelled 16.6 16 PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase 64 c3kizA_ not modelled 16.2 24 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of putative phosphoribosylformylglycinamidine cyclo-2 ligase (yp_676759.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution 65 c3crqA_ not modelled 16.0 22 PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel 66 c2yxbA_ not modelled 16.0 25 PDB header:isomerase Chain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix 67 c1wv9B_ not modelled 15.8 32 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:rhodanese homolog tt1651; PDBTitle: crystal structure of rhodanese homolog tt1651 from an2 extremely thermophilic bacterium thermus thermophilus hb8 68 c1sz1A_ not modelled 15.6 20 PDB header:transferase/rna Chain: A: PDB Molecule:trna nucleotidyltransferase; PDBTitle: mechanism of cca-adding enzymes specificity revealed by crystal2 structures of ternary complexes 69 c3nojA_ not modelled 15.6 36 PDB header:lyase Chain: A: PDB Molecule:4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate PDBTitle: the structure of hmg/cha aldolase from the protocatechuate degradation2 pathway of pseudomonas putida 70 c2pfrB_ not modelled 15.5 22 PDB header:transferase Chain: B: PDB Molecule:arylamine n-acetyltransferase 2; PDBTitle: human n-acetyltransferase 2 71 d2b8ea1 not modelled 15.5 21 Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P 72 c3d9wA_ not modelled 15.0 25 PDB header:transferase Chain: A: PDB Molecule:putative acetyltransferase; PDBTitle: crystal structure analysis of nocardia farcinica arylamine2 n-acetyltransferase 73 d1p49a_ not modelled 14.6 13 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Arylsulfatase 74 d1w4ta1 not modelled 13.7 40 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Arylamine N-acetyltransferase 75 c2crlA_ not modelled 12.7 32 PDB header:chaperone Chain: A: PDB Molecule:copper chaperone for superoxide dismutase; PDBTitle: the apo form of hma domain of copper chaperone for2 superoxide dismutase 76 c3ff4A_ not modelled 12.3 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein chu_1412 77 c3lnbA_ not modelled 12.1 33 PDB header:transferase Chain: A: PDB Molecule:n-acetyltransferase family protein; PDBTitle: crystal structure analysis of arylamine n-acetyltransferase c from2 bacillus anthracis 78 d1r9la_ not modelled 12.0 19 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 79 d1zpda1 not modelled 11.9 16 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 80 c3ix9B_ not modelled 11.9 19 PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrofolate reductase; PDBTitle: crystal structure of streptococcus pneumoniae dihydrofolate2 reductase - sp9 mutant 81 c1cliD_ not modelled 11.8 32 PDB header:ligase Chain: D: PDB Molecule:protein (phosphoribosyl-aminoimidazole synthetase); PDBTitle: x-ray crystal structure of aminoimidazole ribonucleotide synthetase2 (purm), from the e. coli purine biosynthetic pathway, at 2.5 a3 resolution 82 d1jcea2 not modelled 11.5 29 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Actin/HSP70 83 d1fe0a_ not modelled 11.5 21 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 84 d1xpja_ not modelled 11.4 8 Fold:HAD-like Superfamily:HAD-like Family:Hypothetical protein VC0232 85 d1xbta1 not modelled 11.4 10 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Type II thymidine kinase 86 c2pr7A_ not modelled 11.3 11 PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase/epoxide hydrolase family; PDBTitle: crystal structure of uncharacterized protein (np_599989.1) from2 corynebacterium glutamicum atcc 13032 kitasato at 1.44 a resolution 87 d2b7oa1 not modelled 11.2 46 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class-II DAHP synthetase 88 c3u1nC_ not modelled 11.0 10 PDB header:hydrolase Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: structure of the catalytic core of human samhd1 89 c2jtqA_ not modelled 11.0 22 PDB header:transferase Chain: A: PDB Molecule:phage shock protein e; PDBTitle: rhodanese from e.coli 90 c3fozB_ not modelled 11.0 27 PDB header:transferase/rna Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase; PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe) 91 c3fryB_ not modelled 11.0 35 PDB header:hydrolase Chain: B: PDB Molecule:probable copper-exporting p-type atpase a; PDBTitle: crystal structure of the copa c-terminal metal binding domain 92 c2i7dB_ not modelled 10.9 15 PDB header:hydrolase Chain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+ 93 d1z5ga1 not modelled 10.8 21 Fold:HAD-like Superfamily:HAD-like Family:Class B acid phosphatase, AphA 94 c2kmvA_ not modelled 10.7 21 PDB header:hydrolase Chain: A: PDB Molecule:copper-transporting atpase 1; PDBTitle: solution structure of the nucleotide binding domain of the2 human menkes protein in the atp-free form 95 c2v9yA_ not modelled 10.7 23 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: human aminoimidazole ribonucleotide synthetase 96 c2z01A_ not modelled 10.7 27 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of phosphoribosylaminoimidazole2 synthetase from geobacillus kaustophilus 97 d1nlna_ not modelled 10.5 13 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 98 d2bsza1 not modelled 10.4 27 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Arylamine N-acetyltransferase 99 d1u6za1 not modelled 10.3 10 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:Ppx associated domain