Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABF1
Confidence99.96%DateThu Jan 5 11:15:21 GMT 2012
Rank10Aligned Residues203
% Identity18%Templated1vfga1
SCOP infoPoly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220.........230....... ..240.........250.........260........
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Query Sequence  VIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATL. . LNDIPPARLFEESLKLLQAGYGYETYKLLCE
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Template Sequence  VIRVLHP. . VSFIEDPVRILRALRFAGRLNFKLSRSTEKLLKQAVNLGLLKEAPRGRLINEIKLALREDRFLEILELYRK
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B

SST..T
TTT

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TTGGGTS

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   137..140... ......150.........160.........170.........180.........190.........200.........210....
 
   269270.........280.........290.........300.........310.........320.........330.........340........
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Query Sequence  YHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALA
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Template Sequence  YRVLEEIIEGFQWNEKVLQKLYALR. . . KVVDWHALEFSEERIDYGWLYLLILI. SNLDYER. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
STT



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   215....220.........230......... 240.........250.........260..... ....270..
 
   349350.........360.........370.........380 .........390.........400.........410.........420...
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Query Sequence  MNDVLDEACRSLAIPKRLTTLTRDIWQLQLRM. . . . . SRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWW
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Template Sequence  . . . . GKHFLEEMSAPSWVRETYKFMKFKLGSLKEELKKAKENYEVYRLLKPLH. . . . . . TSVLLLLMLEEELKEKIKLYL
Template Known Secondary structure  ....TTT

TT
SSSTTTGGGG......TTTSGGG
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   273......280.........290.........300.........310.........320. ........330.........340..
 
   424...
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Query Sequence  GEFQ
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Template Sequence  EKLR
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   343...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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