Job Description P0ABF1 Confidence 99.96% Date Thu Jan 5 11:15:21 GMT 2012 Rank 10 Aligned Residues 203 % Identity 18% Template d1vfga1 SCOP info Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Resolution 2.80

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		V	I	R	L	I	G	N	P	E	T	R	Y	R	E	D	P	V	R	M	L	R	A	V	R	F	A	A	K	L	G	M	R	I	S	P	E	T	A	E	P	I	P	R	L	A	T	L	.	.	L	N	D	I	P	P	A	R	L	F	E	E	S	L	K	L	L	Q	A	G	Y	G	Y	E	T	Y	K	L	L	C	E
Query Conservation																																																	.	.
Alig confidence									.	.																																							.	.
Template Conservation									.	.
Template Sequence		V	I	R	V	L	H	P	.	.	V	S	F	I	E	D	P	V	R	I	L	R	A	L	R	F	A	G	R	L	N	F	K	L	S	R	S	T	E	K	L	L	K	Q	A	V	N	L	G	L	L	K	E	A	P	R	G	R	L	I	N	E	I	K	L	A	L	R	E	D	R	F	L	E	I	L	E	L	Y	R	K
Template Known Secondary structure			B			S	S	T	.	.	T						T	T													T			B														T	T	G	G	G	T	S																S	S
Template Predicted Secondary structure									.	.
Template SS confidence
		137	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	L	F	Q	P	L	F	P	T	I	T	R	Y	F	T	E	N	G	D	S	P	M	E	R	I	I	E	Q	V	L	K	N	T	D	T	R	I	H	N	D	M	R	V	N	P	A	F	L	F	A	A	M	F	W	Y	P	L	L	E	T	A	Q	K	I	A	Q	E	S	G	L	T	Y	H	D	A	F	A	L	A
Query Conservation
Alig confidence																											.	.	.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	V	L	E	E	I	I	E	G	F	Q	W	N	E	K	V	L	Q	K	L	Y	A	L	R	.	.	.	K	V	V	D	W	H	A	L	E	F	S	E	E	R	I	D	Y	G	W	L	Y	L	L	I	L	I	.	S	N	L	D	Y	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T						S	T	T																.	.	.										G	G	G	S														.		S			S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380						.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		M	N	D	V	L	D	E	A	C	R	S	L	A	I	P	K	R	L	T	T	L	T	R	D	I	W	Q	L	Q	L	R	M	.	.	.	.	.	S	R	R	Q	G	K	R	A	W	K	L	L	E	H	P	K	F	R	A	A	Y	D	L	L	A	L	R	A	E	V	E	R	N	A	E	L	Q	R	L	V	K	W	W
Query Conservation																																		.	.	.	.	.
Alig confidence		.	.	.	.																													.	.	.	.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																		.	.	.	.	.	.
Template Sequence		.	.	.	.	G	K	H	F	L	E	E	M	S	A	P	S	W	V	R	E	T	Y	K	F	M	K	F	K	L	G	S	L	K	E	E	L	K	K	A	K	E	N	Y	E	V	Y	R	L	L	K	P	L	H	.	.	.	.	.	.	T	S	V	L	L	L	L	M	L	E	E	E	L	K	E	K	I	K	L	Y	L
Template Known Secondary structure		.	.	.	.	T							T	T																								T	T		S	S	S	T					T	T	G	G	G	G	.	.	.	.	.	.	T							T	T	S	G	G	G
Template Predicted Secondary structure		.	.	.	.																																																		.	.	.	.	.	.
Template SS confidence
						273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.							.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		424	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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