Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABF1
Confidence69.02%DateThu Jan 5 11:15:21 GMT 2012
Rank16Aligned Residues79
% Identity20%Templated1r89a2
SCOP infoNucleotidyltransferase Nucleotidyltransferase Archaeal tRNA CCA-adding enzyme catalytic domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80...... ...90....... ..100........
Predicted Secondary structure 












....

........




Query SS confidence 













































. . . .










. . . . . . . .










Query Sequence  RKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTN. . . . ATPEQVRKLFR. . . . . . . . NCRLVGRRFRL
Query Conservation     
   
  

  
   
  





 


 


    
 

 
 ....
 
      
 ........    

  
  
Alig confidence 


































.









....










........










Template Conservation            
   
     
    

  
 
 
 .   



    
                          

 


Template Sequence  VRKGREAEEELRRRLDELGVEYVFVGSYARNTWLK. GSLEIDVFLLFPEEFSKEELRERGLEIGKAVLDSYEIRYAEHPY
Template Known Secondary structure  T

T


T.T


TTS
SSSSSS
Template Predicted Secondary structure 












.













Template SS confidence 















































































   21........30.........40.........50..... ....60.........70.........80.........90.........
 
   109110.........120
Predicted Secondary structure 

Query SS confidence 











Query Sequence  AHVMFGPEIIEV
Query Conservation    
      


Alig confidence 











Template Conservation 
     
  


Template Sequence  VHGVVKGVEVDV
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 











   100.........110.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions