Job Description P0ABF1 Confidence 99.96% Date Thu Jan 5 11:15:21 GMT 2012 Rank 11 Aligned Residues 193 % Identity 19% Template d1ou5a1 SCOP info Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Resolution 3.40

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		V	I	R	L	I	G	N	P	E	T	R	Y	R	E	D	P	V	R	M	L	R	A	V	R	F	A	A	K	L	G	M	R	I	.	.	.	S	P	E	T	A	E	P	I	P	R	L	A	T	L	L	N	D	I	P	P	A	R	L	F	E	E	S	L	K	L	L	Q	A	G	Y	G	Y	E	T	Y	K	L	L	C
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		K	V	R	F	V	G	H	A	K	Q	R	I	Q	E	D	Y	L	R	I	L	R	Y	F	R	F	Y	G	R	I	V	D	K	P	G	D	H	D	P	E	T	L	E	A	I	A	E	N	A	K	G	L	A	G	I	S	G	E	R	I	W	V	E	L	K	K	I	L	V	G	N	H	V	N	H	L	I	H	L	I	Y
Template Known Secondary structure						S	S	T	T	T	T	T	S	S	S		T	T												S		S	S	S	S													S		T	T	G	G	G	S		S												T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	H	L	F	Q	P	L	F	P	T	I	T	R	Y	F	T	E	N	G	D	S	P	M	E	R	I	I	E	Q	V	L	K	N	T	D	T	R	I	H	N	D	M	R	V	N	P	A	F	L	F	A	A	M	F	W	Y	P	L	L	E	T	A	Q	K	I	A	Q	E	S	G	L	T	Y	H	D	A	F	A	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																.											.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																.											.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	D	V	A	P	Y	I	G	L	P	A	N	A	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	F	D	K	V	S	K	N	V	D	G	F	S	P	.	K	P	V	T	L	L	A	S	L	F	.	K	V	Q	D	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T		G	G	G	G	T					S			.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S			.							G	G	G		.		S	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																.											.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.														.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.							.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		A	M	N	D	V	L	D	E	A	C	R	S	L	A	I	P	K	R	L	T	T	L	T	R	D	I	W	Q	L	Q	L	R	M	S	R	R	Q	G	K	R	.	.	.	.	.	.	A	W	K	L	L	E	H	P	K	F	R	A	A	Y	D	L	L	A	L	R	A	E	V	E	R	N	A	E	L	Q	R	L	V	K
Query Conservation																																										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	K	L	D	L	R	L	K	I	A	K	E	E	K	N	L	G	L	F	I	V	K	N	R	K	D	L	I	K	A	T	D	S	S	D	P	L	K	P	Y	Q	D	F	I	I	D	S	R	E	P	D	A	T	T	R	V	C	E	L	L	K	Y	Q	G	E	H	C	L	L	K	E	M	Q	Q
Template Known Secondary structure		.	.	.	.	.	.											T	T									T	T	T	T	T	T	T	S				S	S	S	S	T	T												S	T	T													T									T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		422
Predicted Secondary structure
Query SS confidence
Query Sequence		W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		352

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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