Job Description P0ABF1 Confidence 99.97% Date Thu Jan 5 11:15:21 GMT 2012 Rank 9 Aligned Residues 234 % Identity 21% Template d1miwa1 SCOP info Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Poly A polymerase C-terminal region-like Resolution 3.00

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	R	L	I	G	N	P	E	T	R	Y	R	E	D	P	V	R	M	L	R	A	V	R	F	A	A	K	L	G	M	R	I	S	P	E	T	A	E	P	I	P	R	L	A	T	L	L	N	D	I	P	P	A	R	L	F	E	E	S	L	K	L	L	Q	A	G	Y	G	Y	E	T	Y	K	L	L	C	E	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	R	T	V	G	E	A	E	K	R	F	R	E	D	A	L	R	X	X	R	A	V	R	F	V	S	E	L	G	F	A	L	A	P	D	T	E	Q	A	I	V	Q	N	A	P	L	L	A	H	I	S	V	E	R	X	T	X	E	X	E	K	L	L	G	G	P	F	A	A	R	A	L	P	L	L	A	E	T	G
Template Known Secondary structure			B			S	S										T																	B												G	G	G	G	G	G	S														T	S	S	S											S	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	Q	P	L	F	P	T	I	T	R	Y	F	T	E	N	G	D	S	P	M	E	R	I	I	E	Q	V	L	K	N	T	D	T	R	I	H	N	D	M	R	V	N	P	A	F	L	F	A	A	M	F	W	Y	P	L	L	E	T	A	Q	K	I	A	Q	E	S	G	L	T	Y	H	D	A	F	A	L	A	M	N
Query Conservation
Alig confidence					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	A	.	Y	L	P	G	L	A	G	K	E	K	Q	L	R	L	A	A	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	P	W	L	A	A	R	E	E	R	W	A	L	L	C	.	H	A	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T	.	S	S	T	T		S	S								G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G			S										.				T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240															.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	D	E	A	C	R	S	L	A	I	P	K	R	L	T	T	L	T	R	D	I	W	Q	L	Q	L	R	M	S	R	R	Q	G	K	R	A	W	K	L	L	E	H	P	K	F	R	A	A	Y	D	L	L	A	L	R	A	E	V	E	R	N	A	E	L	Q	R	L	V	K	W	W	G	E	F	Q	V	S	A
Query Conservation
Alig confidence																																																														.	.
Template Conservation																																																														.	.
Template Sequence		Q	E	S	R	P	F	L	R	A	W	K	L	P	N	K	V	V	D	E	A	G	A	I	L	T	A	L	A	D	I	P	R	P	E	A	W	T	N	E	Q	L	F	S	A	G	L	E	R	A	L	S	V	E	T	V	R	A	A	F	T	.	.	G	A	P	P	G	P	W	H	E	K	L	R	R	R	F	A	S	L
Template Known Secondary structure		S									T	T																					S	G	G	G																										.	.				S												T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		431	.									.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.
Query Sequence		P	P	.	.	.	.	.	.	.	.	D	Q	K	G	M	L	N	E	L	D	E	E	P	S	P	R	R	R	T	R	R	P	R	K	R	A	P	R	R	E	G	T
Query Conservation				.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	K	T	K	G	E	L	A	V	N	G	K	D	V	I	E	W	V	G	K	P	A	G	P	W	V	K	E	A	L	D	A	I	W	R	A	V	V	N	G	E
Template Known Secondary structure		S		S	S	G	G	G		S	S										T			S	S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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